Protein

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Genbank accession
XQU50098.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLWGNKDTVYSTGNITTITSGGVVTGSGTTFTDSTLVEAGQVIEMGAYGSGVIKSVDSNTQLTLDSAAGLTAASGLTQAFNISESPKYLAKDSNWAGNEVYGSDTAEVGAAVGTIYEHTHAGWVGITTYTDTHGNTRTKTEVFVAGSSITTDAGDDSVLADS
Physico‐chemical
properties
protein length:163 AA
molecular weight: 16647,81520 Da
isoelectric point:4,21668
aromaticity:0,07362
hydropathy:-0,11350

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM2R
[NCBI] 		3400247 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU50098.1 [NCBI]
Genbank nucleotide accession
PQ898602.1 [NCBI]
CDS location
range 157585 -> 158076
strand +
CDS
ATGTCTCTCTGGGGTAACAAAGATACTGTCTATTCGACAGGCAATATCACCACTATCACTTCTGGTGGTGTAGTCACTGGATCTGGTACCACCTTCACCGACTCTACTCTTGTCGAAGCAGGACAAGTTATTGAGATGGGTGCATATGGTAGTGGTGTCATTAAGTCTGTAGATTCTAATACACAATTAACACTCGACAGCGCTGCTGGTCTGACCGCAGCTTCTGGTCTAACTCAGGCATTCAACATCAGTGAGTCTCCTAAGTATCTTGCTAAGGATTCTAACTGGGCAGGTAACGAGGTCTATGGATCTGACACTGCTGAGGTTGGTGCAGCTGTAGGTACAATTTACGAACACACCCACGCAGGTTGGGTTGGTATTACCACCTACACCGATACACACGGAAACACCAGAACCAAGACCGAAGTCTTCGTTGCTGGATCTTCGATTACTACTGACGCTGGAGACGATTCCGTACTGGCAGATAGCTGA

Tertiary structure

PDB ID
e0212351a9309d707dd7c0e86d15b6ba4422ee7c633bb7fbeb1083cb4c8d25ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Unveiling a novel broad-host-range cyanophage cross-infecting Prochlorococcus and Synechococcus hosts Wei,S., Cai,L., Zhang,R., Xu,Y. and Li,J. — — GenBank