Protein

View in Explore
Genbank accession
XYL02208.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MYVGTSMKDSDNYPDYTWRLTDEHIEGQINGKEGAWIYSPTAPANPSQGLIWVDLSKVPNQPKRWVDSETGWVALTPEEVKDLPWGEDGTSLADWVSQAEQRISSDSIINTVLGSEDFTSVFDTKANTSDLGNLATYEDLDSIKEDYNRLIKEGINGIDFTPYVTNSELQQLKDSFNFSVQQAGGVNMLKNSLGFSGLDFWNGTVGKNLLPNSTWNLGFGRWGGTSITSFEILPPEDDKPTSNILASMPLRSSTKEIGNRPHPLKVNSGETYTVSFDYKEEALSYNKDRPILVVRNYPDKDTDQWMEYSIEGWAVMANGSTTDLTVWRRFTKTFTIGTSGYLDILPKTIIESWEHRSFWRELKIEKGTQATTWVPNKEDGAFTGDIVETIQTEELANLGFGSGFISSKRPSSSLTQSVELPEIGANLEYSLSFYMKVTTDNPVADFKCGIRVYDGGTLTYTLGIEDATQPIPLGFQQYKLVFTPTSTSTKIEMFVENGQEASVIISGIMYNIGSIPLKWQPYPSEIYNTNVKIDINGVTVKNNQTDGYTMITPQEFSGYSRIDGNIERIFTLNGQVTEVKMLKAEKRITMEPVSVFAMNTVTDTKRIRGWAFVPSFE
Physico‐chemical
properties
protein length:617 AA
molecular weight: 69093,40620 Da
isoelectric point:4,66793
aromaticity:0,10859
hydropathy:-0,43063

Domains

Domains [InterPro]
DC_1746
STR
88–419
DC_1746
DC_0336
RBD
347–590
DC_0336
G3DSA:2.60.120.260
STR
363–509
G3DSA:2.60.120.260
XYL02208.1
1 617
Architecture
STR
RBD
STR 88-509 | RBD 510-590 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL02208.1
1 617
Domain Start End Length (AA) Confidence
N-terminal 1 195 195 0,9877
Central domain 196 418 224 0,4395
C-terminal 419 617 198 0,2767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-195
Central
196-418
C-terminal
419-617

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage ECP3
[NCBI] 		3433638 Viruses >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02208.1 [NCBI]
Genbank nucleotide accession
PV685963.1 [NCBI]
CDS location
range 62405 -> 64258
strand -
CDS
ATGTATGTAGGTACCTCTATGAAAGATAGTGATAACTATCCAGATTATACATGGAGGCTAACTGATGAACATATAGAAGGTCAGATTAATGGTAAGGAAGGCGCATGGATTTACTCTCCAACAGCCCCTGCTAACCCATCGCAAGGACTTATATGGGTAGACTTGTCAAAAGTCCCCAACCAACCTAAGCGTTGGGTAGATTCAGAAACTGGGTGGGTTGCATTAACACCAGAAGAGGTTAAAGATTTGCCTTGGGGTGAAGATGGCACAAGCTTAGCCGACTGGGTGTCACAGGCAGAGCAAAGAATATCTTCTGATAGCATTATAAATACTGTACTAGGTTCTGAGGATTTCACTAGTGTGTTCGATACAAAAGCTAACACTTCTGACCTAGGTAACTTGGCTACCTATGAAGACTTAGACTCAATAAAAGAGGACTATAACCGGCTAATCAAAGAAGGCATAAATGGTATTGATTTTACTCCTTATGTGACTAACTCCGAACTACAACAGCTTAAAGACAGCTTTAACTTCTCTGTTCAACAAGCCGGAGGGGTTAACATGCTTAAAAACTCTTTAGGATTCTCTGGGTTAGACTTCTGGAATGGTACAGTAGGGAAGAACTTACTACCTAACTCTACTTGGAATTTAGGTTTTGGTAGATGGGGTGGTACTTCAATCACTAGTTTTGAAATATTACCACCAGAAGATGACAAGCCTACGAGTAACATATTAGCCTCAATGCCACTTCGCTCTTCTACTAAAGAAATAGGTAACAGACCTCACCCATTAAAAGTTAACTCGGGTGAAACGTACACAGTAAGCTTCGACTATAAAGAAGAAGCATTATCTTACAACAAGGACAGACCTATCCTTGTTGTAAGAAACTACCCTGATAAGGACACAGACCAATGGATGGAGTACTCAATAGAAGGTTGGGCAGTAATGGCTAACGGAAGCACTACTGACTTGACTGTTTGGAGACGTTTTACAAAAACATTTACAATAGGTACTAGTGGCTACTTAGATATTTTACCGAAAACCATAATAGAATCGTGGGAACACAGGTCTTTTTGGAGAGAGCTAAAAATAGAGAAAGGGACACAAGCCACTACTTGGGTACCTAACAAGGAAGACGGGGCGTTTACTGGTGATATTGTTGAGACTATTCAAACAGAAGAATTAGCCAACCTCGGGTTTGGTTCCGGATTTATTAGTTCTAAAAGACCTAGCTCTTCATTAACACAATCTGTAGAACTACCTGAAATAGGTGCTAACCTTGAGTATTCACTATCTTTTTATATGAAGGTAACTACAGATAACCCTGTAGCTGACTTTAAATGCGGTATTCGGGTTTATGATGGAGGTACTCTAACTTATACATTAGGCATAGAAGATGCAACACAGCCAATACCACTAGGGTTCCAACAATACAAGCTTGTGTTCACTCCCACAAGTACCTCTACTAAAATAGAAATGTTTGTAGAAAATGGGCAAGAGGCATCTGTTATTATATCAGGTATTATGTATAATATCGGGAGTATACCTCTTAAATGGCAACCATATCCAAGTGAGATATACAATACGAATGTTAAGATTGATATTAATGGGGTAACCGTTAAAAACAATCAAACAGATGGGTATACAATGATTACTCCCCAAGAGTTTTCAGGATACTCTCGTATTGATGGTAACATAGAACGTATTTTCACTTTAAATGGACAGGTAACAGAAGTTAAAATGCTAAAGGCTGAAAAACGTATAACTATGGAACCAGTATCTGTATTCGCTATGAACACAGTAACGGATACAAAAAGAATTAGAGGTTGGGCATTTGTGCCATCATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59c01b5821a5cbc9ace200b1e5e450320ecf398d8e8956de8d563c107fe069b0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50