Protein

View in Explore
Genbank accession
XCO38617.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MLNNLNQPKGSTIGVLRDGRTVQEAFDSLMYTEVLLKTGKENAESNRAALQAAADSTKLLAVPAGEYYLSSHVTLRTGNVIVGRGASAFSSGYTRLVCETPGEGIFWYTGDTSTGQKRMPQVYNMGLKGDYPIRFNDERTAIIADQAASNVPYGMVPVVQFCTIDPLTNGVGIGISASKMLDGVFSFNEIANFDTGVLLNGCDLMFVAHNRIRNAYRYMVLELGVGTFGSQNEIYHNDILHAGSTDCIFIKSTARHVRIYDNYLEQASGTSGQALIGFIDASAVDAPSFNGNAPAVRASTIIKDNRIDGQHFAKYFVYKYQPSSQTYGVIEDVSTVGPNTGLGANHLVLVDSSGNTVDRVPFLYNSVQTCSFRFSGPRFGKWNGYSSVSDFSLKLTGLNMSMWGTSLGGNSLKDYLSARGNSLILANGFTAAAVLQFPAGTLVRPSSQYAIKVTAKCSSGSETLTFAGVANGVGQTSVSMQLSTEPTSATTQFTSGSTQSGFSLGRSSNGADIEILAIEFIKLYSLEYSVVADTGATTVYRGSGDVVISASGNLQFPAYVVLRYIGGSLKEVYKSVTDAAVIDIAWSVSGQTLTVNITGSGGGKRFSVTQEEV
Physico‐chemical
properties
protein length:613 AA
molecular weight: 65341,58860 Da
isoelectric point:6,03360
aromaticity:0,09625
hydropathy:-0,01860

Domains

Domains [InterPro]
IPR012334
18–388
IPR012334
Coil
40–60
Coil
IPR011050
47–360
IPR011050
XCO38617.1
1 613
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146020
[NCBI] 		3232200 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38617.1 [NCBI]
Genbank nucleotide accession
PP889470.1 [NCBI]
CDS location
range 38069 -> 39910
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACCGTCCAAGAGGCATTCGACTCACTGATGTACACAGAGGTCTTACTGAAGACTGGTAAGGAGAACGCTGAATCAAACAGGGCTGCCCTTCAGGCCGCAGCGGATTCCACTAAGTTACTGGCGGTACCGGCTGGTGAGTACTACCTATCGTCCCACGTAACCCTCCGCACTGGCAACGTCATAGTAGGACGCGGAGCCAGCGCATTCTCTTCAGGATACACACGGTTAGTGTGCGAGACTCCGGGTGAGGGCATATTCTGGTACACTGGCGACACCTCCACGGGGCAGAAGCGGATGCCTCAGGTGTACAACATGGGATTAAAGGGGGACTACCCGATTCGGTTCAATGATGAGCGTACGGCTATTATAGCAGACCAAGCTGCGTCTAACGTTCCGTATGGTATGGTTCCTGTCGTTCAGTTCTGTACAATCGACCCCTTAACTAACGGTGTTGGGATTGGCATATCTGCGTCTAAAATGCTTGATGGTGTGTTCTCTTTCAACGAAATTGCTAACTTCGACACAGGCGTTCTCCTCAATGGGTGCGACCTCATGTTCGTTGCCCATAACCGCATCCGTAACGCCTACAGGTACATGGTGCTGGAGCTTGGTGTCGGGACATTCGGTTCTCAGAACGAGATTTATCACAACGACATTCTTCACGCTGGGTCTACAGATTGTATCTTCATCAAATCAACGGCTCGACACGTTCGTATCTACGACAATTATCTGGAGCAGGCTTCAGGCACGAGTGGTCAGGCTCTCATTGGGTTCATTGACGCCTCGGCTGTCGATGCTCCGTCATTCAATGGGAATGCTCCGGCGGTTCGCGCCTCAACCATCATAAAGGACAACCGCATAGACGGGCAGCACTTCGCCAAGTATTTCGTGTACAAATATCAGCCATCGAGTCAGACATACGGTGTTATCGAGGATGTGTCTACGGTGGGTCCGAACACTGGCCTTGGCGCAAACCACTTGGTACTTGTGGACTCCTCCGGTAACACGGTCGACAGAGTACCCTTCCTGTACAACTCAGTGCAGACATGCTCCTTCCGCTTCTCTGGCCCAAGGTTCGGTAAGTGGAACGGGTATAGCTCTGTGAGTGACTTCTCACTTAAACTGACTGGTCTGAACATGTCAATGTGGGGCACGTCGTTAGGTGGTAACAGCCTCAAGGACTACCTGTCTGCGCGCGGTAACTCGCTGATTCTGGCAAACGGCTTCACGGCAGCGGCTGTTCTACAGTTCCCGGCAGGTACATTGGTTCGACCATCCTCACAGTATGCTATCAAGGTTACCGCGAAGTGTTCGTCTGGAAGTGAGACACTGACGTTTGCTGGTGTTGCTAACGGTGTTGGTCAGACAAGTGTGTCGATGCAGCTGAGCACCGAGCCAACGAGCGCCACAACCCAGTTCACATCCGGCTCCACTCAGAGTGGTTTCTCACTGGGACGCTCCAGCAACGGTGCGGACATTGAGATACTGGCTATTGAGTTTATCAAGCTGTACTCTCTGGAATACTCGGTGGTTGCTGACACAGGCGCGACTACGGTATACCGTGGGTCTGGAGACGTGGTTATTTCAGCCTCTGGAAACCTGCAATTCCCGGCGTACGTAGTTCTTCGGTACATTGGCGGAAGCCTCAAGGAAGTGTATAAGAGCGTCACTGATGCTGCCGTTATTGACATTGCGTGGTCCGTATCTGGCCAGACCCTTACCGTGAACATTACGGGGAGTGGTGGTGGTAAGCGGTTCTCCGTCACACAGGAGGAGGTATAA

Tertiary structure

PDB ID
4e32d6451d7b660449b3da9801b8a60c9325231c53c0dd197c8338431dc04af9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank