Protein

View in Explore
Genbank accession
WBF81709.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MPHLKAYDKEGNILSIGYDVETEQGSVIIPNLKPHTNYPQGEFYVSWEGDNYESEKVVVPEFTTLESSYKEVTFYAKDILTVKPKTAYDIAVDNGFEGTEEEWVKSIKGEQGPQGPQGPQGPQGEQGIQGIKGDRGLQGPQGPKGDRGADGVDGIDGTMTFEELTEEQKATLKGADGAQGEQGPQGPKGDKGEPGEKGEQGERGPEGSEGPKGDIGPQGPKGDIGPQGPKGDIGEDGIDGEIGPQGPTGPMGPKGDKGNTGEKGEKGNSSVNQTRLPQILRKQYFENLEIPVVNSDNGIVEQINPLNAQAVNYYFIGNVLDINAPETKTADFSQFQQGIVTMCWTDSSVTLSNAKIQTYINTTNTAFALLHIYNGKPVLDKAYISPSMREDYMNDLIKTFGNRNDFEIKLGKGIIFDISRRFTNLATLKTIVDEISANKGDYLQLHFSDDQGYSIYSEILGQNGTTSNDKYLTKKEIMELIDYANNKNVMIVPDFDVPSHSQGWLDLLKAKNPDLYTNVVSDYDTGLADYYGNDTTAKFIESLIEEITTMFYQPKYGDRLVFSIGADEVPGVNVAQIDYVNFVNRMAKKVYERGYYPRMWNDCLTDDGIKMLNDNIEVSYWLQGISSAEKFIEENKMVVNCNFYSLVYSPSLEGKAEGVIDEQLEYVRSNFAENEFCEKENPYTIVDTKDNLKGTAFTFWNEGGNELTDEELLNQVIPIIKTYLTLA
Physico‐chemical
properties
protein length:727 AA
molecular weight: 80390,26160 Da
isoelectric point:4,48388
aromaticity:0,09491
hydropathy:-0,62669

Domains

Domains [InterPro]
IPR050149
105–268
IPR050149 IPR025705 IPR025705 IPR025705 IPR025705
IPR008160
109–157
IPR008160 IPR008160 G3DSA:3.20.20.80
G3DSA:1.20.5.320
127–174
G3DSA:1.20.5.320 IPR015883
IPR017853
413–708
IPR017853
WBF81709.1
1 727
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus virus vB_SurM-PSU5
[NCBI] 		3003796 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF81709.1 [NCBI]
Genbank nucleotide accession
OP913463.1 [NCBI]
CDS location
range 12741 -> 14924
strand -
CDS
ATGCCACATTTAAAAGCATACGATAAAGAAGGTAATATATTATCTATTGGTTATGATGTAGAAACTGAACAAGGGTCAGTTATTATACCTAACTTAAAACCACATACTAATTATCCACAAGGAGAATTTTATGTTTCATGGGAAGGGGATAACTACGAGTCAGAAAAAGTAGTAGTTCCTGAATTTACTACATTAGAATCTTCGTATAAAGAGGTTACTTTTTATGCTAAAGACATCTTAACTGTTAAACCTAAAACAGCTTATGATATAGCAGTAGATAATGGATTCGAAGGAACAGAAGAAGAATGGGTTAAGTCCATTAAAGGGGAACAAGGTCCTCAAGGTCCTCAAGGTCCTCAAGGTCCTCAAGGGGAGCAAGGTATTCAAGGTATTAAAGGAGATAGAGGTTTACAAGGTCCACAAGGACCGAAAGGTGATAGAGGTGCAGATGGTGTTGATGGTATAGATGGTACCATGACATTTGAAGAATTAACTGAAGAACAAAAAGCAACGCTAAAAGGTGCAGATGGAGCACAAGGAGAGCAAGGTCCACAAGGACCTAAGGGTGATAAAGGTGAACCTGGTGAAAAAGGAGAACAGGGTGAGCGTGGTCCTGAAGGCTCTGAGGGACCTAAAGGAGATATAGGTCCACAAGGTCCTAAAGGAGATATAGGTCCACAAGGTCCTAAAGGAGATATAGGTGAAGATGGAATTGATGGTGAAATAGGTCCACAAGGTCCAACAGGCCCTATGGGACCAAAAGGGGATAAGGGTAACACTGGAGAAAAAGGTGAAAAAGGAAATAGTTCTGTAAATCAAACTAGACTACCTCAAATATTAAGAAAGCAATATTTTGAAAACTTAGAAATTCCAGTAGTCAATAGTGATAACGGAATTGTAGAGCAAATCAACCCACTCAATGCACAAGCGGTAAATTACTATTTTATCGGTAATGTTTTGGATATTAATGCACCAGAAACAAAAACAGCTGATTTTTCACAGTTTCAACAAGGTATTGTAACAATGTGTTGGACTGATAGTTCAGTCACTTTATCTAATGCTAAAATACAAACTTATATAAATACGACAAATACTGCTTTTGCTTTGTTACACATATATAACGGAAAACCTGTCTTAGACAAAGCCTATATCAGTCCGTCTATGAGAGAAGATTATATGAATGACCTAATCAAAACGTTTGGAAATAGAAACGATTTTGAAATTAAATTAGGAAAGGGTATTATTTTCGATATTTCAAGACGTTTCACCAACTTAGCAACATTAAAAACAATTGTTGACGAAATTTCAGCTAACAAAGGAGATTATTTACAACTACATTTTTCTGATGACCAAGGTTATTCAATTTATTCAGAAATTTTAGGGCAGAATGGAACTACAAGTAATGATAAATATTTAACTAAAAAAGAAATTATGGAACTTATAGACTATGCTAATAACAAAAATGTTATGATTGTTCCTGATTTTGATGTCCCAAGTCATTCTCAAGGTTGGTTAGACTTATTAAAAGCAAAAAACCCCGATTTATACACTAATGTAGTGTCTGATTATGATACTGGTTTGGCAGATTATTACGGAAATGATACTACTGCAAAATTTATAGAGAGTCTGATTGAAGAAATTACAACTATGTTTTATCAACCTAAATATGGGGACAGATTAGTTTTCTCAATTGGAGCCGATGAAGTACCTGGTGTCAATGTTGCTCAAATTGATTATGTGAATTTTGTCAATAGAATGGCTAAAAAAGTTTATGAGAGAGGTTATTATCCTAGAATGTGGAATGACTGTCTTACAGACGATGGTATTAAAATGTTAAACGATAATATTGAGGTGTCTTATTGGCTACAAGGGATATCTTCTGCCGAGAAATTTATTGAGGAAAATAAGATGGTAGTTAATTGTAATTTCTATTCTCTAGTTTATAGTCCGTCTTTAGAGGGGAAAGCTGAGGGTGTCATTGATGAACAATTAGAGTATGTACGTTCTAATTTTGCTGAAAATGAGTTTTGTGAGAAAGAAAATCCATATACAATAGTTGATACTAAAGATAATTTAAAAGGTACAGCTTTTACTTTTTGGAATGAAGGTGGTAACGAATTAACAGATGAAGAATTGTTAAATCAAGTTATACCAATTATAAAAACATATTTAACACTTGCTTAA

Tertiary structure

PDB ID
bf7c6b3fb8d27eedc50d5f74ae51e6a7e1cc3704b79a0126e485586dc528c123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus virus vB_SurM-PSU5 Kwon,H., Park,S.Y. and Kim,J.H. 2016-07-06 — GenBank