Protein

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Genbank accession
AFU62485.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MAIETNAVVITDLNPLYPRDRDYIYEGAAQIRLIKQTLQNTFPNVTEPVDIDSDTFKIMSEKLKFTGDAMDVGGLMIKNVTPGTGDRDVVTKGQMEAFMKNWMENKLYRIGSYYITEEDINPGDSISLGFGSWAKVTGVIMGTGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRTENVPLMTVNGSSFSLSSNTHSHNMVFGRGDASGHNSSPNWYSPGGGYSQRTENDTHSHTISGSVSLGRDDISRQPINTLPPFRSAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29272,33230 Da
isoelectric point:5,86382
aromaticity:0,08240
hydropathy:-0,44794

Domains

Domains [InterPro]
DC_0570
ATT
1–70
DC_0570 DC_0154
IPR053827
ATT
105–266
IPR053827
AFU62485.1
1 267
Architecture
ATT
STR
ATT
ATT 1-70 | STR 71-104 | ATT 105-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage NJ01
[NCBI] 		1237159 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus NJ01
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU62485.1 [NCBI]
Genbank nucleotide accession
JX867715 [NCBI]
CDS location
range 21919 -> 22722
strand +
CDS
TTGGCTATCGAAACTAATGCGGTAGTTATTACCGACTTAAACCCACTCTATCCTAGAGACAGGGATTACATCTACGAAGGGGCGGCTCAAATCCGCCTCATTAAACAAACACTACAGAATACATTCCCCAATGTTACAGAACCAGTTGATATAGATTCTGATACCTTTAAGATTATGTCAGAGAAGCTCAAGTTTACTGGCGATGCAATGGATGTTGGTGGTCTGATGATTAAGAACGTCACTCCGGGGACTGGTGACAGGGATGTTGTTACTAAAGGTCAGATGGAAGCGTTCATGAAGAACTGGATGGAGAATAAGCTCTATCGAATTGGCTCTTACTATATCACTGAAGAAGATATTAACCCCGGTGACTCGATCTCCCTAGGGTTTGGTTCTTGGGCTAAAGTTACTGGTGTTATCATGGGTACTGGTGTTGTAAACCCTGATGGCTCTGTTCCTAATGCTCAGAGGGTTGAGTTCCAAGCAGGTGGTACTGGTGGTCGTGTCTTCAATACTATTCGTACAGAGAACGTACCTTTGATGACAGTTAATGGCTCCAGCTTCTCCTTATCCAGCAACACCCATAGTCACAACATGGTGTTTGGTCGTGGAGATGCTAGTGGTCATAACAGCTCGCCTAACTGGTACAGTCCGGGTGGTGGTTACAGTCAGAGAACAGAGAATGATACACACTCTCATACAATCTCTGGTAGTGTGAGTCTTGGTCGTGATGACATTTCTCGTCAACCTATCAACACTTTGCCACCATTCAGATCGGCTCACATTTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7790ebbca7758479fca7569c0aa792b9e9964fc506ff91fd5f1733c189642c0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7045
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Novel Lytic Avian Pathogenic Coliphage NJ01 Li,Y., Chen,M., Tang,F., Yao,H., Lu,C. and Zhang,W. 2012 23166270 GenBank