Protein

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Genbank accession
ALO80252.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSCKECEEIDNLTCGCEEYCDCSIKLSTICSYYDGVKLKIINTYEGENLESVLLKVEELFKSIFEILNGSLYLNIGEGAKVYKRNNSRNQAEFRTILTSNSVSVVEYSEEIGLNINEDWLLAFLTENNPTDTNTSFVNVIAGHRIATYRSEDNTQTDINETVTSLTYNTDGTLTYVNESGVPSTFSIGEDTLTTVTNTVQGKRIATYINESGNSVAINETVTSMQSIGNQTLTYTNENGVTTSYRPTSSTTTVEGINAFSTTTQVIEGTNNATSITPLGLSARTATETRTGLQANATQAESNALLSTNKTLTPGRLPKASTTQQGIVRLATSTEISAGTSNSVGVTPAGLEQRINSLPQSIIAKADIDFGDFFSTGSSRNLTISNSLNITSAVVIESQTNDARIRVSGSFGSSYIPTIALISKGSWNVDNDTFAMYKNLSSGSMEVLLRQIDDAGGIQDIQIRIIVSSF
Physico‐chemical
properties
protein length:469 AA
molecular weight: 50626,43690 Da
isoelectric point:4,54942
aromaticity:0,06397
hydropathy:-0,22345

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1_18
[NCBI] 		1747285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80252.1 [NCBI]
Genbank nucleotide accession
KT962246 [NCBI]
CDS location
range 51027 -> 52436
strand -
CDS
ATGAGTTGCAAAGAATGTGAAGAAATAGATAATTTAACTTGTGGATGTGAAGAGTATTGTGATTGTAGTATAAAACTATCCACAATATGCTCTTACTATGATGGAGTTAAACTGAAGATAATAAATACATACGAAGGAGAAAATTTAGAGTCTGTCCTATTAAAAGTGGAAGAACTATTTAAGAGTATATTTGAAATATTAAACGGGTCCCTGTATTTAAATATAGGAGAAGGAGCTAAAGTTTATAAAAGGAATAACAGCAGAAATCAGGCAGAGTTTAGAACTATCCTAACTTCTAACAGTGTTTCGGTAGTAGAATACTCTGAAGAGATAGGTTTAAATATAAATGAAGATTGGTTACTTGCTTTTTTAACAGAAAACAACCCGACTGATACAAACACCTCTTTTGTTAATGTAATAGCTGGACATAGAATAGCAACGTATAGAAGCGAAGATAACACTCAAACAGATATAAATGAAACAGTTACATCTTTAACTTATAATACAGATGGCACCTTAACATATGTAAATGAAAGTGGAGTACCTTCAACTTTTAGTATAGGAGAAGATACCTTAACTACTGTTACAAACACTGTCCAAGGTAAGAGAATAGCTACTTATATAAATGAGTCTGGTAACAGCGTGGCAATAAATGAAACAGTAACTTCTATGCAAAGTATAGGTAATCAAACGCTAACTTATACAAATGAAAATGGAGTTACAACATCTTACAGGCCCACGTCAAGTACAACAACAGTGGAAGGTATAAATGCCTTTTCAACGACCACTCAAGTTATAGAAGGCACTAATAACGCTACTAGTATAACACCTCTAGGATTGTCTGCAAGGACTGCCACAGAAACTAGAACAGGTTTACAAGCTAATGCTACACAAGCTGAATCTAATGCATTATTATCAACTAATAAGACTCTTACTCCTGGAAGATTGCCAAAGGCAAGTACAACTCAGCAAGGTATAGTAAGGCTTGCTACTTCTACTGAAATATCAGCAGGAACTTCTAACAGTGTTGGAGTAACACCAGCTGGTTTAGAACAACGAATAAACAGTTTACCTCAATCTATTATAGCTAAAGCAGACATAGACTTTGGGGACTTTTTCTCTACAGGGTCTAGTAGGAACTTAACAATAAGTAATAGCCTTAATATAACTTCAGCTGTAGTTATTGAAAGCCAAACTAATGATGCCAGAATAAGGGTATCAGGATCTTTTGGAAGTAGTTATATACCAACAATAGCTTTAATATCAAAAGGGTCTTGGAATGTGGATAATGATACTTTTGCAATGTACAAAAATTTAAGTTCTGGAAGCATGGAAGTGCTTTTAAGGCAAATTGACGATGCAGGGGGAATACAAGATATTCAGATAAGAATAATAGTTTCAAGTTTTTAA

Tertiary structure

PDB ID
9b654d31a50700653cd367d843460e75f17168a1629477843e0d95e1b25fa5ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6947
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank