Protein

View in Explore
Genbank accession
AXQ70290.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKVFSVILKPLAKLLSPSVKGASSNLANLQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGYLDIRPEDITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYVTVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTITFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFSATEEGIFALPNRAVSVVKGSRMATYDGYVTAVNGLTVELSQPVKFTPGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSSGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93954,99080 Da
isoelectric point:5,23751
aromaticity:0,09742
hydropathy:-0,36901

Domains

Domains [InterPro]
NF040662
352–832
NF040662
AXQ70290.1
1 852
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella virus VSt10
[NCBI] 		2301722 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXQ70290.1 [NCBI]
Genbank nucleotide accession
MH424445.1 [NCBI]
CDS location
range 20437 -> 22995
strand +
CDS
TTGGCGCTAGTAATCCACTACACCCGCAACGAAGACGGCACATTTGACGTTAAACGTTACCGCGATAATCCGATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTAGAATCTGCCGGTGGGGGGGCTATTAAAGGCGTCATGAAGGTTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTACTATCACCATCCGTGAAAGGGGCGTCCTCTAACCTGGCGAACTTGCAGGCGGATTCCCCGAACAACAGTCTCACCGACCGCAACAACAAGGCGCGCCCGTACGAGCGCAGTTACGACATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTACAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGTTATTACGACGCCGGTCGCGGCTATCTTGACATACGCCCTGAAGATATCACTGACGGGGACACCCGTGTATCAGATATAACAGGCACGTCGGTTGCCGTGTACGCACCGTATACGTCACCCAATAACACGTCTACACCCCAGGTCATGGTCGGAGACCCGATAGAGCAGGGCCTGTATGTTACCGTAGAATCTAACGAAGTCGATGGCGTGGTTCTTAAAGCTCCCAACGGCCTGGGCATTTCTTTCTCTTACATGTCCGGGTACCCGTCTTTGTCTGGAAACATTGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGGGTGTTGGTGCCTAATGATACATTTTCGCTGGTGTCAGCGTGGACAAATACGGACGTCGACCTATCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACAATTACATTTATTGTACCTGGCGGCCTTATCGGTCGGTGGCAAGAAATAAGACCAGGTTCATTTTTTCGAGGTGACGGAGAGGCGTCGCTGCAACCGGATAATACATACGAGAAAACATTAACCGATTGGGTGTCTATAAACCGCACCGAGGTTGAGCGCATAGTCGCCAATATCGCTGCGGCCAACGGCATGTATAAAGACAACGGCAAGTCAAAAACACTGGCATCCGTTACCGCTGAGATACAGTACCAGCTACTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACTGTACACTCGATGCGCAAGCAGACACCGCGTGCTGCAGAAGTTAAGCAACCACAGTTGCGCATGATTGCGACCGAAATGGTATACAAATACCTTGGTAATGGCGTTTTTGAGGATACGATGACTCCCAATACCCAGGCCGTGCAATCTCTCATCCGCCTGGCACGTGACCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGCGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGTCATCAGAAAAACATATTGAAGAAGATTTCAGTGTCTTTTAGTGCTACTGAAGAAGGAATCTTTGCCCTGCCAAATCGTGCTGTTAGTGTGGTTAAGGGTTCCCGTATGGCTACCTACGACGGCTACGTAACTGCGGTGAACGGCCTCACCGTAGAGCTTTCGCAGCCAGTTAAGTTCACCCCCGGGGATGACCATTCTTTGGTTCTTAAGCTGAGAGATGGCGGCGTCCAAAGTGTTCGCGTTGTCCCTGGTGCACACGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAGCGGATTCGATAACGGTTTTAACTAA

Tertiary structure

PDB ID
6c60c9653ab3b149ecc453508578b03804bc3cf562a5c62378bb6d5289c1d1fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella Typhimurium bacteriophage VSt10 Volozhantsev,N., Denisenko,E., Verevkin,V., Myakinina,V., Kislichkina,A. and Krasilnikova,V. 2017-09-14 — GenBank