Protein

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Genbank accession
BBA26455.1 [GenBank]
Protein name
tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQTTKNLKSGISQQPDILRYPEQGAVQINGWSSETEGLQKRPPLVFSKVLGAKGYLGTNPYIHLINRDEFEQYYACFTGTGVKVFDLTGNEYTVRGDNSYVTVANPREDLRMVTIADYTFIVNRTKVVDTLPDVSLPNFREKGSALINIRGGQYGRTLLVYLNDDVEEVAKLELPNGSDPSHVKQTDSQYIAEELAKQIRLKLPTWTITVGTGYVYIEAPVGTDIDKFITKDGYADQLIAPVTHFAQSFNKLPANAPDGYIIKIVGDTSKTADQYYVKWDAARKVWGETIGWGSEYKLDPVTMPWALVRAADGNFDLKMNTWTERKCGDEDTNPFPSFVDAKINDVFFWRNRLGFLSGENVILSRTAKYFGFFPTSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEEMLIWADEAQFVMNAQGVLSSRSVELNLTTQFDVYDKARPYGIGRNIYFASPRATFTSINRYYAVQDVSSVKNAEDMTSHVPSYIPNGVFQIHGSATENYASVLTSGAESKVFLYKFLYQNETLQQQSWSHWDFGDNIRILSAASINSTMFLILENNGHVFMGYVLFTKDTVDYLGEPYRGYLDGKKAYTVPVGAYNEDTNETTVNISTVYGMGFDKGTISALEGDGRVTSFEEPQGGWAANPTITFDGNLEGVTLFLGFNFLFTYEFSKFLIKKRADDGSIASEDTGRLQLRRAWVNYEDSGAFRIEVQNQSRTFEYLMGGARVGSQGLRASRLNVATGQYRFPVNGDARLNTVRIFSDYTTPLNVIGCGWEGNYMKRTTGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88775,48550 Da
isoelectric point:5,22000
aromaticity:0,12484
hydropathy:-0,31173

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
BBA26455.1
1 793
Architecture
TTP
TTP 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBA26455.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9946
Central domain 141 347 208 0,2274
C-terminal 348 793 445 0,1185
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-347
C-terminal
348-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PPWS4
[NCBI] 		1961914 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pektosvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBA26455.1 [NCBI]
Genbank nucleotide accession
LC216347 [NCBI]
CDS location
range 24512 -> 26893
strand +
CDS
ATGGCCTTAGTATCACAAACAACAAAGAACCTGAAGTCAGGTATCAGCCAACAGCCAGATATCTTAAGGTATCCCGAGCAGGGGGCAGTACAGATTAATGGCTGGTCGTCTGAGACTGAAGGTCTCCAAAAGAGACCACCTTTAGTGTTCAGTAAGGTTCTGGGCGCTAAGGGATACTTGGGCACCAATCCTTACATCCACCTAATCAACCGTGATGAGTTCGAGCAGTATTACGCTTGCTTCACAGGGACGGGCGTTAAGGTGTTCGACCTTACTGGAAATGAATACACCGTCCGTGGTGATAACTCATACGTCACCGTAGCGAACCCAAGGGAAGACTTAAGGATGGTGACCATTGCTGACTATACGTTCATCGTTAATCGCACCAAGGTGGTCGATACGCTCCCTGATGTGTCCCTTCCGAACTTCAGAGAGAAAGGCTCAGCGTTGATTAACATCCGTGGTGGTCAGTATGGGCGTACACTTCTGGTGTATCTCAATGATGACGTTGAGGAGGTTGCTAAGCTGGAACTGCCAAACGGTAGCGACCCGAGTCACGTTAAGCAAACAGACTCACAGTACATCGCTGAGGAGCTGGCTAAGCAAATTCGCCTTAAGTTACCCACTTGGACAATTACGGTCGGTACTGGTTATGTCTACATTGAAGCACCAGTCGGTACGGACATCGATAAGTTTATCACCAAGGATGGCTACGCTGACCAATTGATTGCCCCTGTGACCCACTTTGCGCAGTCATTCAATAAGCTCCCAGCGAATGCGCCTGATGGTTACATTATCAAAATCGTAGGGGACACCTCTAAGACTGCCGACCAGTATTACGTTAAGTGGGATGCAGCTCGTAAGGTCTGGGGTGAAACCATCGGCTGGGGTTCTGAATACAAGCTCGACCCTGTGACCATGCCTTGGGCTTTGGTACGTGCAGCAGATGGTAACTTCGACCTCAAGATGAACACTTGGACTGAACGTAAATGTGGCGATGAGGATACCAACCCCTTCCCATCGTTTGTTGACGCCAAGATTAACGATGTGTTCTTCTGGAGAAACCGTTTAGGGTTCCTTAGCGGTGAGAACGTTATCCTGTCCCGCACCGCCAAATACTTTGGGTTCTTCCCAACGAGCGTTGCGAACCTCAGTGACGATGACCCGATTGATGTTGCGGTCAGCCATAACCGAGTGTCAACCCTTAAGTACGCCGTTCCGTTCACTGAGGAGATGCTTATCTGGGCTGACGAAGCGCAGTTCGTGATGAATGCTCAAGGTGTTCTATCAAGCCGAAGCGTAGAGCTTAATCTTACGACTCAGTTTGATGTGTACGATAAGGCGCGGCCTTATGGCATTGGTCGTAACATCTACTTTGCGTCTCCTCGGGCAACCTTTACGAGTATCAACCGATACTATGCTGTGCAGGACGTCTCCAGTGTTAAGAACGCTGAGGACATGACCAGTCACGTACCAAGTTACATCCCTAACGGTGTCTTCCAGATTCACGGGTCGGCTACCGAGAATTACGCCAGCGTGTTAACTTCAGGTGCAGAGTCGAAAGTATTCCTCTATAAGTTCCTCTATCAGAACGAGACGCTACAGCAGCAATCTTGGTCTCATTGGGACTTTGGGGACAACATTCGGATTCTCTCTGCGGCGTCCATTAACTCCACCATGTTCCTCATTCTGGAGAACAATGGGCACGTCTTTATGGGCTACGTTCTGTTCACTAAGGACACCGTGGATTATCTGGGTGAGCCTTACCGTGGATATCTGGATGGTAAGAAAGCCTACACGGTTCCTGTGGGTGCCTACAATGAGGACACCAATGAGACCACTGTGAACATCTCAACGGTGTACGGTATGGGATTCGATAAGGGAACTATCAGCGCACTTGAGGGTGACGGTCGTGTGACATCCTTTGAGGAGCCACAAGGAGGCTGGGCGGCTAACCCTACGATTACCTTTGATGGTAACCTTGAAGGTGTGACGTTGTTCCTTGGGTTCAACTTCTTGTTCACTTATGAGTTCTCTAAGTTCCTCATTAAGAAGCGGGCTGATGATGGCTCTATTGCCTCAGAGGATACTGGTAGATTACAACTCCGTAGGGCATGGGTAAACTATGAGGACTCGGGTGCATTCCGCATTGAGGTTCAGAACCAATCGCGCACCTTTGAGTATCTTATGGGAGGTGCTCGTGTAGGTTCTCAAGGTCTCAGAGCGTCACGCCTCAATGTGGCTACTGGTCAGTATCGATTCCCTGTGAATGGTGACGCAAGGTTGAACACTGTGAGAATCTTCAGTGACTACACAACACCACTGAACGTAATTGGTTGTGGTTGGGAAGGTAATTACATGAAGAGAACCACGGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a68fff6bc037a415fd93d22e07069559686363e8eee2886f816fd10362f67d35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9027
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
T7phage infectious to Pectobacterium Hirata,H. and Kashihara,M. 2023-07-08 — GenBank