Protein

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Genbank accession
XAO34322.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MANVIKVKQSSVTGKVPTTAQLALGELAVNTTDGKLFLKKSVSGVESIVDVTAAASGASIPAGAVMLFGMSAAPVGWTQTTTDVADNRMLRVVNTTGGGTGGSHSPILNNVVPSHTHGFTTGTVSADHYHGGWTGGVNANHAHGQNVSANPGSGGPGIRMDYDADGSGYSSYYQGIETLAQTSDHAHYINTGGASANHTHSGSTDNGSSQTNWTPRYVDLIMCTKN
Physico‐chemical
properties
protein length:226 AA
molecular weight: 23103,08750 Da
isoelectric point:6,38361
aromaticity:0,05752
hydropathy:-0,26637

Domains

Domains [InterPro]
DC_2021
ATT
1–224
DC_2021
SSF88874
STR
58–225
SSF88874
XAO34322.1
1 226
Architecture
ATT
ATT 1-225 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO34322.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8376
Central domain 11 208 199 0,0015
C-terminal 209 226 17 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage PY059YO380
[NCBI] 		3145150 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO34322.1 [NCBI]
Genbank nucleotide accession
PP358256 [NCBI]
CDS location
range 20855 -> 21535
strand +
CDS
ATGGCAAACGTAATAAAAGTCAAGCAGTCGTCGGTAACGGGTAAAGTCCCGACGACTGCCCAACTCGCTCTTGGCGAGCTGGCGGTCAATACGACCGATGGCAAACTTTTCCTGAAGAAAAGCGTCAGTGGCGTCGAATCGATTGTCGACGTAACTGCCGCAGCCTCTGGTGCTTCAATACCTGCTGGCGCTGTTATGCTGTTTGGCATGTCTGCTGCTCCTGTCGGATGGACACAAACAACAACCGATGTCGCCGACAACAGAATGCTGCGAGTGGTGAACACAACAGGCGGTGGCACAGGCGGTTCGCACAGTCCGATCCTGAACAACGTGGTGCCGTCGCACACCCACGGTTTCACAACCGGAACTGTTTCAGCAGACCACTATCACGGCGGTTGGACTGGTGGCGTAAACGCGAACCACGCGCACGGACAAAACGTCTCTGCGAACCCAGGAAGTGGCGGTCCAGGCATCCGCATGGACTACGATGCGGATGGAAGTGGGTACAGCTCTTACTACCAAGGCATCGAGACACTAGCGCAGACGTCTGATCACGCTCACTATATCAACACTGGCGGCGCTAGCGCCAACCACACCCACTCCGGCTCGACGGACAACGGATCCAGCCAAACCAACTGGACTCCGCGCTACGTCGATTTAATCATGTGCACTAAGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1589e511464388ac853eda3ff8c72f1a5e6f99d857d070fd112268ee5a52958
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage biocontrol success depends on synergistic interactions with suppressive soil microbiota Fields,B., Franco Ortega,S., Harper,A. and Friman,V. 2024-11 — GenBank