Protein

View in Explore
Genbank accession
XAO34322.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MANVIKVKQSSVTGKVPTTAQLALGELAVNTTDGKLFLKKSVSGVESIVDVTAAASGASIPAGAVMLFGMSAAPVGWTQTTTDVADNRMLRVVNTTGGGTGGSHSPILNNVVPSHTHGFTTGTVSADHYHGGWTGGVNANHAHGQNVSANPGSGGPGIRMDYDADGSGYSSYYQGIETLAQTSDHAHYINTGGASANHTHSGSTDNGSSQTNWTPRYVDLIMCTKN
Physico‐chemical
properties
protein length:226 AA
molecular weight: 23103,08750 Da
isoelectric point:6,38361
aromaticity:0,05752
hydropathy:-0,26637

Domains

Domains [InterPro]
SSF88874
58–225
SSF88874
XAO34322.1
1 226
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage PY059YO380
[NCBI] 		3145150 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO34322.1 [NCBI]
Genbank nucleotide accession
PP358256 [NCBI]
CDS location
range 20855 -> 21535
strand +
CDS
ATGGCAAACGTAATAAAAGTCAAGCAGTCGTCGGTAACGGGTAAAGTCCCGACGACTGCCCAACTCGCTCTTGGCGAGCTGGCGGTCAATACGACCGATGGCAAACTTTTCCTGAAGAAAAGCGTCAGTGGCGTCGAATCGATTGTCGACGTAACTGCCGCAGCCTCTGGTGCTTCAATACCTGCTGGCGCTGTTATGCTGTTTGGCATGTCTGCTGCTCCTGTCGGATGGACACAAACAACAACCGATGTCGCCGACAACAGAATGCTGCGAGTGGTGAACACAACAGGCGGTGGCACAGGCGGTTCGCACAGTCCGATCCTGAACAACGTGGTGCCGTCGCACACCCACGGTTTCACAACCGGAACTGTTTCAGCAGACCACTATCACGGCGGTTGGACTGGTGGCGTAAACGCGAACCACGCGCACGGACAAAACGTCTCTGCGAACCCAGGAAGTGGCGGTCCAGGCATCCGCATGGACTACGATGCGGATGGAAGTGGGTACAGCTCTTACTACCAAGGCATCGAGACACTAGCGCAGACGTCTGATCACGCTCACTATATCAACACTGGCGGCGCTAGCGCCAACCACACCCACTCCGGCTCGACGGACAACGGATCCAGCCAAACCAACTGGACTCCGCGCTACGTCGATTTAATCATGTGCACTAAGAACTAA

Tertiary structure

PDB ID
d1589e511464388ac853eda3ff8c72f1a5e6f99d857d070fd112268ee5a52958
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage biocontrol success depends on synergistic interactions with suppressive soil microbiota Fields,B., Franco Ortega,S., Harper,A. and Friman,V. 2024-11 — GenBank