Protein

View in Explore
Genbank accession
ASD52861.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKTIVITLLLSISTYSQVGIATTTPTETLDVNGTARVRNLTDGTIQTNSTGVLSIMPYKAYAMAVVSLNCSILRGFGVASVTRLNNTTYRVSFVNPLPNNDYVINFSARQRQLSYDNVTVNGFDVIVSQNPNQITNFDFNFSVFSIY
Physico‐chemical
properties
protein length:147 AA
molecular weight: 16194,17570 Da
isoelectric point:8,84978
aromaticity:0,10204
hydropathy:0,14558

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage V157
[NCBI] 		1984750 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium columnare
[NCBI] 		996 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASD52861.1 [NCBI]
Genbank nucleotide accession
KY979240.1 [NCBI]
CDS location
range 47496 -> 47939
strand +
CDS
ATGAAAACAATTGTTATCACATTATTATTATCAATATCAACTTATTCTCAAGTTGGTATTGCAACAACAACACCAACTGAAACTTTAGATGTAAACGGAACGGCAAGAGTTCGAAATTTGACAGATGGAACAATTCAAACAAACTCAACAGGTGTTTTATCAATTATGCCTTATAAAGCTTATGCAATGGCTGTAGTATCTTTAAATTGTTCTATTTTAAGAGGTTTTGGAGTGGCTAGCGTAACAAGGTTAAACAACACAACGTATAGGGTTAGTTTTGTCAACCCGCTACCTAATAACGACTATGTTATAAACTTTTCAGCGCGCCAAAGACAATTGAGTTATGACAATGTTACGGTTAATGGTTTTGATGTAATAGTTAGCCAAAACCCTAACCAAATAACAAATTTTGATTTTAACTTTTCAGTATTTTCAATTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
03326a6e1bf7b66488507ccce1eefc623fad37044697272fe5605d17383f2ceb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7676
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Long-term genomic coevolution of host-parasite interaction in the natural environment Laanto,E., Hoikkala,V., Ravantti,J. and Sundberg,L.-R. — — GenBank