Protein

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Genbank accession
YP_009830724.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKYQSFSFNGKRKDYILMPVGRKRPAWAPIKRNFLTMEGRPGAVLLNTEIEVRQIDVPLIVKAENIADLQKVKEDLADWLVTAQECELIFDDEPDRTYMAVVDGAFDADELINRGKGVVTFIAPMPYKLGPVNKIPFVQSWSTETTANFINKGSVEAETPAYIEITANKPSTFLDVWFGKYPNERNYFRIGYPISAAEKPVQSRERVLWDDMSKVIGWTPVTGKFEDMNGTGSFKVKDGHALYCEDYGQDKGFYGAIAKKNIPGGPIQDFEMEAWVNLRSKSIEEMGRIEVLLLDDSSNLVARINMNDLYVTAEITKAHMKIGSESTPGSLRKLVDTSGFYTTTFNQFRGRLRIARRGKQWSVYVAKFIDGTEIDGASLVERFNDEDNSNPMTNRKIAQVMIALCRWDNHPAVSYMCIEDLKIWKVNNVSENTKPFIFETGDKIIIDSEKSAVTINGKNALNLKDIFSEFPVVIKGENRMDIMPADCNATISFRERYK
Physico‐chemical
properties
protein length:499 AA
molecular weight: 56609,98680 Da
isoelectric point:5,64681
aromaticity:0,10220
hydropathy:-0,37134

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–131
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR006520
Unmapped
7–129
IPR006520 IPR054738
IPR008841
STR
23–123
IPR008841
DC_0259
STR
44–463
DC_0259
YP_009830724.1
1 499
Architecture
ATT
STR
RBD
ATT 1-131 | STR 132-463 | RBD 464-498 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009830724.1
1 499
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,9907
Central domain 179 377 200 0,2223
C-terminal 378 499 121 0,5282
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-377
C-terminal
378-499

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BtS_BMBtp14
[NCBI] 		1868826 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009830724.1 [NCBI]
Genbank nucleotide accession
NC_048640 [NCBI]
CDS location
range 43010 -> 44509
strand +
CDS
ATGGAAAAATATCAAAGCTTTTCGTTTAATGGTAAACGTAAAGATTATATATTAATGCCTGTTGGTAGGAAGCGTCCTGCATGGGCTCCTATAAAGAGAAATTTCTTAACTATGGAGGGTAGACCAGGAGCAGTCTTACTTAATACCGAAATTGAGGTGCGTCAAATTGACGTGCCTCTTATTGTTAAAGCAGAAAATATTGCTGATTTACAAAAAGTTAAGGAAGATTTAGCAGATTGGTTAGTTACAGCACAGGAATGTGAATTAATTTTCGATGATGAACCAGATAGAACGTATATGGCAGTTGTGGATGGCGCTTTTGACGCTGATGAACTAATTAACCGTGGAAAAGGAGTAGTTACTTTTATTGCGCCTATGCCATATAAATTAGGCCCGGTTAATAAAATTCCTTTTGTACAAAGTTGGTCGACCGAAACTACAGCTAACTTTATTAACAAAGGCAGCGTAGAAGCTGAAACCCCTGCGTACATTGAGATTACTGCAAACAAACCAAGTACTTTTCTAGATGTTTGGTTTGGGAAATACCCGAATGAGCGTAATTATTTCAGGATTGGGTACCCTATTTCAGCTGCGGAAAAGCCCGTACAATCCAGAGAACGCGTTCTATGGGATGATATGTCTAAAGTAATAGGTTGGACTCCCGTAACAGGGAAATTCGAAGACATGAACGGTACTGGTAGTTTTAAGGTGAAAGACGGACATGCGCTGTATTGCGAAGATTACGGACAAGATAAAGGGTTTTATGGTGCAATTGCCAAGAAAAACATTCCTGGTGGCCCTATTCAAGATTTTGAAATGGAAGCATGGGTAAATCTGAGGTCCAAAAGTATAGAGGAAATGGGTCGAATCGAAGTTTTACTGCTCGATGATTCAAGTAACCTCGTAGCGCGTATTAACATGAATGATCTATATGTCACTGCAGAAATTACAAAAGCTCATATGAAAATCGGATCAGAATCGACGCCAGGTAGCCTACGTAAATTAGTTGATACCAGCGGATTTTATACAACTACATTCAATCAATTTCGGGGGCGCCTGCGTATTGCTAGGAGAGGTAAACAATGGTCTGTATATGTAGCTAAATTTATAGATGGTACAGAGATAGACGGAGCATCACTTGTAGAACGTTTCAACGATGAGGATAACAGTAATCCAATGACAAATCGAAAAATCGCACAAGTAATGATTGCGCTGTGTAGATGGGATAATCATCCTGCAGTTTCTTATATGTGTATAGAAGATTTAAAGATATGGAAAGTGAACAATGTATCTGAAAATACAAAACCATTTATATTCGAAACAGGAGATAAAATAATAATCGATTCAGAAAAAAGTGCTGTAACAATTAACGGAAAAAACGCTTTAAATTTAAAAGATATTTTCAGTGAGTTCCCTGTCGTTATAAAAGGGGAAAATCGCATGGATATTATGCCTGCTGATTGTAACGCTACCATTAGTTTTAGGGAGAGATACAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cee687764e517b6bc931bb68f9481d0f1b18ff2a7a233c5cf92d6697a2162c9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Undiscovered low abundance phages are ubiquitous in bacterial genomes Dong,Z., Liu,H., Zheng,J. and Peng,D. 2008-12-30 — GenBank