Protein

View in Explore
Genbank accession
AAW51256.2 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MSTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYSPYTSPNNTSAPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEVTYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMSTYDGYVTAVNGLTVELSQPVKFTSGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSSGFDNGFN
Physico‐chemical
properties
protein length:709 AA
molecular weight: 78172,38770 Da
isoelectric point:5,31100
aromaticity:0,10296
hydropathy:-0,36841

Domains

Domains [InterPro]
NF040662
209–689
NF040662
AAW51256.2
1 709
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SS3e
[NCBI] 		293644 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium
[NCBI] 		90371 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAW51256.2 [NCBI]
Genbank nucleotide accession
AY730274 [NCBI]
CDS location
range 32712 -> 34841
strand -
CDS
ATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGTTACCTAGACATACACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGCACGTCGGTTGCCGTGTACTCACCATATACATCGCCCAATAACACATCGGCACCCCAGGTCATGGTCGGCGACCCTATAGAGCAGGGCCTGTACATTACCGTAGAATCTAACGAAGTAGATGGCGTGGTTCTTAAAGCTCCCAACGGCCTGGGTATTTCTTTCTCTTACATGTCCGGGTACCCGTCTTTGTCCGGGAACATTGGCACAATATATGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGTGCCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACAGATGTTGACCTTTCCGGGGGTGGGTACCAAGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATAGTACCCGGTGGTCTCATTGGTAGGTGGCAAGAAATAAGACCCGGTTCGTTTTTCCGCGGTGACGGGGAAGCGTCGCTGCAACCTGATAACACGTACGAGAAAACATTAACCGATTGGGTGTCTATAAACCGCACCGAGGTTGAGCGCATAGTCGCCAATATCGCGGCTGCCAATGGTATGTATAAAGACAACGGCAAGTCAAAAACACTGGCATCCGTTACCGCTGAGATACAGTACCAGCTACTCGATGAAAATAGCGTTCCTTACGGGCCAATATACACCGCACAAGGAACCGTGTCCGGGCGTACTCCAGATTATAACGGCGTCACTATTTACGCCGACCTGCCGGTTGTGTCACGGGTGCGGGTGCGCGCCAGAAGGGTAACAGACCTCGACTTTAATTTCGAGGGGTCTGTGGTTGATGAAGTAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACCGTACACTCGATGCGTAAACAGACACCGCGTGCTGCGGAAGTTAAGCAACCACAGTTACGTATGATTGCCACCGAAATGGTACACAAATACCTCGGTAACGGTGTTTTCGAAGATACGATGACACCTAATACACAGGCTGTACAATCCCTCATCCGCCTGGCACGTGACCCGGACGTGGGTGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCGGTGTCGTTTACCGCCACTGAAGAGGGTATTTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGTCTACTTACGACGGCTACGTAACCGCGGTTAACGGTCTTACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTATTTGGTTCTGAAGTTACGTGATGGCGGAGTCCAAAGTGTTCGTGTTGTCCCTGGCGCACATGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAGCGGATTCGATAACGGTTTTAACTAA

Tertiary structure

PDB ID
7649ba12416f2663376780394059173683fb4fa4e5aa7baa3e2fa109c0f6cecf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic Effect of Bacteriophage from Salmonella Typhimurium Kim,S., Kim,S.H., Chun,S.G., Lee,S.W., Kang,Y.H. and Lee,B.K. 2012-01-15 — GenBank