Protein

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Genbank accession
DBA52014.1 [GenBank]
Protein name
ORF56
RBP type
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MNVPPTNAFDKIHSDNGTISAVNFSMPLTVSGGSGIQVKSNNATHTLQISSSISQASGTYNTTQANNVNINSGGYKINFINGTGATVNLKNSGSGNQINVTVSATGTSSGVSSLNALTGALTIACVSGNTTCTNTGGNTITVNTAYNVVVTGGSTQTITKGLTLNALTLGGNAAGGNKNFTGLADVNGTRFFQNGKQVLDTLVAGSGIGISGSGNSRTISNTGILSAITSVNSQTGPSISVIRQPSYTTITNSTNNIKVGIDAAGVMELNGTQTATGGKTFSGGITMSGSNINVNNNNINNINQANLGTSTNTDGLPFNILDFFAIGSPPSFYTDVDQNLYYSSGWKSRQGGGGSHIQMQGGSSLTQGIEFDISDGNTGTAKGGSLNLIQVMQMAQTSITNYVDTLFKTKITQYNSINTKGWGIPAIYGSGRLTGLTGASGTVTSYTVGPSDGDFEVSFNIHATTSTTYSFSILMNYTDDTSVARTVKMPFSTPTAAIQNTFTNTNGPIGDGQSLSIRAKAGTTISIGTDPAGTYTAITYNIDGIIKQIS
Physico‐chemical
properties
protein length:550 AA
molecular weight: 56279,35270 Da
isoelectric point:8,34706
aromaticity:0,06364
hydropathy:-0,14200

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Nitrosopumilaceae spindle-shaped virus
[NCBI] 		3065433 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA52014.1 [NCBI]
Genbank nucleotide accession
BK067788 [NCBI]
CDS location
range 18674 -> 20326
strand -
CDS
ATGAACGTGCCTCCTACAAACGCCTTTGATAAGATCCATTCTGACAACGGTACAATATCCGCAGTTAACTTTTCAATGCCACTAACTGTATCAGGAGGATCAGGCATCCAAGTAAAATCAAACAATGCTACCCACACTCTACAAATATCTTCCAGCATATCACAAGCTTCTGGAACCTATAACACAACTCAGGCCAATAACGTAAACATAAACTCTGGCGGTTACAAGATCAATTTCATAAACGGAACAGGTGCCACAGTGAATCTAAAAAATTCAGGTTCAGGAAACCAGATTAACGTAACTGTATCAGCGACAGGAACATCCAGCGGAGTATCTTCACTTAATGCCTTGACAGGTGCCCTGACTATTGCCTGTGTCTCTGGTAATACTACATGTACAAATACCGGAGGAAATACCATAACAGTCAATACGGCTTATAATGTTGTAGTTACTGGTGGATCAACTCAGACTATAACTAAAGGTCTTACACTAAACGCACTAACTTTAGGTGGTAATGCAGCCGGAGGAAATAAGAATTTTACCGGATTAGCAGATGTGAATGGAACCAGATTCTTTCAGAATGGTAAACAGGTTTTAGATACTCTGGTAGCTGGTTCAGGCATAGGCATATCAGGTTCAGGTAATTCTAGAACCATCTCAAATACTGGTATCTTATCCGCAATCACTTCCGTTAACAGTCAGACAGGACCGTCAATATCTGTAATCAGACAGCCAAGCTATACTACAATAACAAACAGCACCAATAACATCAAAGTTGGAATAGATGCAGCCGGAGTTATGGAGTTAAACGGAACACAAACTGCAACAGGTGGAAAAACATTCAGTGGTGGAATAACCATGTCAGGTTCAAATATTAATGTAAATAATAACAATATAAATAATATTAATCAAGCAAACTTAGGAACAAGTACAAACACTGACGGTTTACCATTTAATATTTTAGATTTTTTTGCAATCGGTTCACCCCCAAGCTTTTACACTGATGTTGACCAAAATCTGTATTATTCATCAGGTTGGAAATCACGCCAAGGAGGGGGTGGTTCACATATTCAAATGCAAGGAGGCTCATCATTAACTCAGGGTATTGAATTTGATATATCTGATGGTAATACTGGAACTGCTAAAGGTGGGTCTTTAAATCTAATACAAGTAATGCAGATGGCACAAACTAGTATTACCAATTATGTAGATACTTTATTCAAGACAAAAATAACGCAATATAATTCAATCAATACTAAGGGATGGGGAATACCCGCAATATACGGATCAGGAAGATTAACAGGACTAACAGGAGCTAGTGGAACAGTAACAAGTTATACAGTTGGTCCCAGTGACGGAGATTTTGAAGTATCATTTAATATTCATGCAACAACATCGACTACATATTCATTTAGTATTTTAATGAACTATACAGATGATACATCAGTAGCAAGAACTGTTAAAATGCCTTTTAGTACTCCTACCGCAGCTATACAAAATACATTCACAAATACTAACGGACCTATTGGGGATGGACAGTCTTTATCAATAAGAGCTAAAGCCGGAACAACTATATCAATAGGAACAGATCCAGCCGGAACATATACTGCAATTACCTATAATATAGATGGAATTATAAAACAAATAAGCTAA

Tertiary structure

PDB ID
b11a240964f861b2099155c35dfed4fe7655c8880096482e7e69c6ce5a79eb90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50