Protein

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Genbank accession
QNI21196.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRNTSFPIRYLVAKKEPDDPDNSTGRMIADSVNGLIDLVGALEDNSSWPDPDPSVVVSKVHNSDYPYLAGSEIRTAFGYFRCISNVPANSNISLTNRNFWALTHMPADGGAAYGGIYDEVNGYFANTATVRLTPDNVIVMRALEDIDPGTPFDPAQWQVDATYDRGGMQDWSGTFDDTATYEAGVFVTYNDGVYVSKDKIETAGPFDPTQWDSVFQVNTTTLFNIKCFIQDTTDDDEEIFIEVITQDFVFKQNFPNSVAVAATAAEADTSLVVLHGATQIGTINFATGDTTGTFVSTGDVSVTTGDTITLKQNGVADKTLANISITLEGLM
Physico‐chemical
properties
protein length:331 AA
molecular weight: 35898,15610 Da
isoelectric point:4,08055
aromaticity:0,10272
hydropathy:-0,18489

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_pir03
[NCBI] 		2762667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNI21196.1 [NCBI]
Genbank nucleotide accession
MT811961.1 [NCBI]
CDS location
range 222682 -> 223677
strand -
CDS
ATGCGGAATACATCATTTCCAATTCGTTACTTGGTGGCTAAAAAAGAACCAGACGATCCAGATAACTCAACCGGCCGCATGATCGCAGACTCGGTGAATGGTCTGATTGACTTGGTTGGTGCACTGGAAGATAATTCCAGTTGGCCAGATCCAGACCCTTCTGTGGTGGTAAGCAAAGTACATAACTCTGATTACCCATACTTGGCAGGATCTGAGATCCGCACTGCTTTTGGTTATTTCCGTTGTATTTCCAACGTACCTGCCAACAGCAACATTAGTTTGACCAACCGTAACTTTTGGGCTTTAACCCACATGCCTGCTGACGGCGGTGCTGCTTATGGCGGCATCTATGATGAAGTAAACGGATACTTTGCCAACACAGCAACAGTACGTCTAACGCCGGACAATGTGATTGTTATGCGTGCGCTGGAAGACATCGATCCAGGTACACCATTTGATCCTGCCCAGTGGCAAGTAGACGCTACGTATGACCGTGGTGGTATGCAAGACTGGTCTGGTACTTTTGATGATACTGCAACCTATGAAGCTGGTGTTTTCGTAACATACAACGACGGTGTATATGTATCGAAGGACAAGATCGAAACGGCAGGTCCATTTGATCCGACTCAGTGGGATTCGGTTTTCCAAGTAAACACAACAACTCTCTTTAATATCAAGTGTTTTATTCAAGACACCACCGATGATGATGAAGAGATCTTTATCGAAGTTATTACACAAGACTTTGTCTTTAAGCAAAACTTCCCTAACTCAGTTGCAGTTGCGGCCACAGCAGCCGAGGCAGATACCTCTCTTGTTGTCCTGCATGGTGCAACCCAGATCGGCACAATCAATTTTGCTACTGGCGACACTACAGGAACATTCGTTTCGACCGGTGACGTTTCAGTAACAACAGGTGATACGATCACACTAAAACAAAACGGCGTAGCCGACAAAACACTGGCTAACATTTCCATTACTTTGGAGGGCTTGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eaf98788e75b9f9e51276c4778b08beda4b6a8bf0746cbff3e5a1a7138d7766d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7520
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological and genomic characterization of a novel jumbo bacteriophage, vB_pir03 with broad host lytic activity against Vibrio harveyi N Misol,G. Jr., Katharios,P. and Kokkari,K. 2020-12-15 — GenBank