Protein

View in Explore
Genbank accession
QDH84230.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
TF
Evidence Phold
Probability 1,00
Protein sequence
MATLLLIENAFRPDANPRQEPVRAGERISSMLRRIGYLKGRGAKAVRKVPFIVVRNGEPVLIAQMSTRIKAKDHISVIHLPKGGGGGSNPLQMVLTVAIAVAAAYTGGLAATAFGSQLAGAAVSAAVMIGGTLLLNMFFPPQMPSAMSLNREKASPTYSISSQGNQARLMEAIPVLYGRFRTFPDLASAPYTESRGNETYLYQLFCITQGQMDIETIQVENDNVSTYGEIEYQIVNPGQSVTLFPDNVISSPAVNNFELTAPDEPGNIKGPFAVSNPGVQVNYVGIDLYLPGGAYRMNDKGRFETSKVNVKFEYQTINDAGVPTGPWQLLFEKEYAFATNTPQSISEKVEVPLARYQVRGYRTSDKPNDNREINTIQWAVMRGYAPSVRQYGDVTLLAMIIKATNNINQQTSRRINVIGTRKLPVWDPVNGWSVNPVATTNPAWAAADMLRNTTYGRRLPTSRINIQELHRLSQVYQARGDEFNGVFDTTSQLWDALTKVLRVGRTVPINYAGLIDFVRNEPKTVPTYMFQPQNMVENSFSTEYAFAEPGSTPNYVQVEYINRETWVSETVDCVLPGVAPTIPAKVQLMGVTSRAQAWREGMSLAAANRDQRRQISFSTGFEGYLPRFGDLVQISHDVPQWGYSGEVLGLNAGPDSEEYGLQGELTTTEELVFVPGLTHQIAFKKRDGSPHGPFNVVPHPSGLYNKAIVQATVAQLQQIYISDGFREELTQYQFGPTERRGLRAIALSATPDSDGKVLLTFTNYAESVHAAENGGVTPPPGPDSNLPGIVTVPIIDSVKLELTPYAWQQLIVATPARGARLYEYEISQDGLNWSNLGTATSPSMQVNLSGGTWFVRVRAIGNLTGPWTTWTGVVEASTLPASRVDHVSITSVVFGIDLEWAVREDDYLAASVEVYWGTTNVLGNATRLIDMPLPGNKFSVTDLGPGAVRYFWFRAIDEAGRVGPWYNNGVGLMGKSSDQADIIMAYLDGKITETQLAQSLIEKIDSGGGAAVEVEAIQSALAAMYTIKTQLTAGGRTALAGIGVGVENNAGVLESQVLVLADRFAVGRADDATGTFKSMFIIDNGNVYIDTAFIKNGTITNAMIGNVLQSNNYVPGVSGWRIDKATNTIEINSPLPGGGRLTIDSQAVVVYDPNGIDRARFGWIP
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 126833,95530 Da
isoelectric point:5,51312
aromaticity:0,08927
hydropathy:-0,15468

Domains

Domains [InterPro]
IPR055385
280–382
IPR055385 IPR032876 IPR015406
NF040662
280–770
NF040662 IPR053171
QDH84230.1
1 1165
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyS_19-32_Axy14
[NCBI] 		2591050 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH84230.1 [NCBI]
Genbank nucleotide accession
MK962633 [NCBI]
CDS location
range 21044 -> 24541
strand +
CDS
ATGGCAACCCTGCTGCTGATTGAAAACGCTTTCCGCCCAGACGCGAATCCCCGGCAAGAGCCGGTTCGCGCCGGCGAGCGTATCAGCTCCATGCTGCGCCGTATCGGCTACCTGAAGGGCCGCGGTGCGAAAGCGGTGCGTAAAGTCCCGTTTATCGTCGTTCGAAACGGCGAACCGGTCCTTATTGCTCAAATGTCTACGCGCATTAAGGCTAAGGACCACATCAGCGTCATCCACCTGCCAAAGGGCGGTGGTGGCGGGAGCAACCCGCTTCAAATGGTGTTGACGGTGGCTATTGCTGTCGCGGCCGCCTATACTGGTGGCTTGGCTGCTACAGCTTTTGGCTCTCAACTGGCAGGCGCGGCAGTATCGGCTGCGGTCATGATTGGCGGCACTTTGCTGCTGAACATGTTCTTCCCACCACAAATGCCGTCAGCCATGTCCTTGAATCGAGAGAAGGCGAGTCCAACGTACTCGATTTCCTCTCAAGGCAACCAGGCTCGGCTTATGGAAGCTATCCCGGTTCTGTACGGTCGCTTCCGCACCTTCCCCGACCTCGCTTCGGCTCCTTATACCGAGTCGCGAGGCAACGAGACTTACCTGTACCAGCTCTTCTGCATCACGCAAGGACAAATGGACATCGAGACCATCCAGGTCGAGAACGACAATGTGTCCACGTACGGGGAAATCGAGTACCAGATTGTCAATCCTGGGCAGTCTGTTACCCTGTTCCCGGACAACGTCATTTCCAGCCCAGCCGTCAACAACTTTGAGCTTACTGCTCCAGATGAACCGGGCAATATTAAGGGGCCTTTTGCTGTCTCGAACCCTGGCGTCCAAGTTAACTACGTTGGTATTGACCTGTATTTGCCTGGCGGCGCATACCGCATGAATGATAAGGGCCGATTCGAGACTTCCAAAGTCAATGTGAAGTTTGAATATCAAACTATCAATGACGCGGGCGTTCCTACCGGTCCTTGGCAACTTCTTTTTGAGAAAGAATACGCCTTTGCCACCAATACTCCTCAGAGCATTTCTGAGAAAGTTGAGGTTCCGCTTGCTCGGTACCAAGTACGAGGCTATCGGACTAGTGACAAGCCGAATGACAACCGTGAAATCAATACGATTCAATGGGCTGTCATGCGCGGCTATGCTCCGTCGGTCCGCCAGTACGGTGACGTGACTTTGCTGGCTATGATTATCAAGGCCACGAACAACATCAACCAGCAAACCTCTCGCCGTATCAATGTGATTGGCACGCGTAAGCTGCCGGTGTGGGACCCTGTCAATGGCTGGTCTGTCAACCCAGTTGCTACGACCAACCCCGCTTGGGCAGCTGCAGACATGCTGCGCAATACGACCTATGGCCGGCGCTTGCCAACTTCCCGTATCAACATTCAAGAGCTGCACCGCCTCTCGCAGGTCTATCAGGCTCGTGGTGACGAGTTCAATGGCGTCTTTGATACCACTTCTCAGCTGTGGGATGCGCTGACGAAAGTCTTGCGGGTGGGTCGGACTGTTCCGATCAACTACGCGGGCCTCATTGACTTTGTGCGCAACGAGCCCAAGACAGTTCCAACCTACATGTTCCAGCCTCAGAACATGGTGGAGAACTCGTTCAGCACTGAATACGCCTTTGCGGAACCGGGCTCTACTCCGAACTATGTTCAAGTTGAGTATATCAACCGTGAAACTTGGGTGTCTGAGACTGTCGACTGCGTGCTACCAGGCGTCGCGCCCACGATTCCGGCAAAGGTGCAGCTCATGGGCGTCACTAGCCGTGCTCAAGCATGGCGTGAAGGCATGTCCTTGGCCGCCGCCAACCGCGATCAGCGCCGTCAAATCAGCTTTTCGACAGGCTTTGAGGGCTATTTGCCTCGCTTCGGCGACCTCGTCCAGATTTCTCACGACGTTCCTCAATGGGGATACTCTGGTGAAGTCTTGGGCTTGAACGCCGGACCGGACAGCGAAGAGTATGGCCTGCAGGGTGAACTGACCACCACGGAAGAGCTTGTATTTGTTCCCGGACTGACCCACCAAATCGCGTTCAAGAAGCGCGATGGGTCGCCGCATGGCCCCTTCAACGTTGTACCGCATCCCTCCGGTCTGTACAACAAGGCCATCGTCCAAGCCACTGTCGCCCAGCTGCAGCAAATCTACATTTCGGACGGTTTTCGGGAGGAGCTGACGCAGTATCAATTCGGTCCTACCGAACGCCGTGGGCTGCGCGCAATCGCGTTGTCGGCTACTCCGGACAGCGACGGAAAAGTGCTGCTGACGTTCACGAACTACGCAGAGAGTGTCCATGCTGCTGAAAACGGGGGTGTTACTCCACCTCCTGGCCCAGACTCGAATCTCCCGGGTATCGTCACGGTGCCCATCATTGATTCAGTCAAGCTGGAGCTGACTCCGTACGCTTGGCAGCAGCTGATCGTGGCTACGCCTGCTCGTGGTGCCCGCTTGTATGAATATGAGATTAGCCAGGATGGCCTCAATTGGTCCAACCTTGGTACGGCTACGTCTCCTTCGATGCAAGTCAACCTCAGTGGTGGCACTTGGTTTGTCCGAGTGCGTGCTATCGGCAACCTGACTGGCCCTTGGACTACTTGGACGGGTGTCGTTGAGGCGTCTACGCTTCCAGCCTCCCGCGTAGACCACGTTTCCATTACGTCTGTTGTGTTTGGTATAGACCTCGAATGGGCCGTGCGTGAAGACGACTATCTGGCTGCGTCCGTTGAAGTGTACTGGGGAACTACCAACGTGCTCGGCAATGCCACCAGGCTTATTGACATGCCGCTACCAGGGAATAAATTCTCTGTCACGGACCTCGGGCCTGGTGCTGTTCGGTACTTCTGGTTCCGAGCGATTGACGAAGCAGGGCGCGTCGGTCCTTGGTACAACAACGGGGTGGGTCTGATGGGTAAGTCCAGCGATCAAGCTGACATCATCATGGCTTATCTGGACGGCAAAATCACTGAGACCCAACTGGCTCAGTCCCTTATCGAGAAGATCGATTCTGGTGGCGGAGCAGCGGTCGAGGTGGAAGCAATCCAAAGCGCCTTGGCTGCAATGTACACCATCAAAACGCAGCTGACGGCTGGTGGCCGTACTGCTCTTGCTGGTATCGGCGTGGGTGTCGAAAACAACGCCGGCGTGCTAGAATCACAAGTACTTGTGTTGGCAGACCGATTTGCGGTGGGTCGTGCTGATGATGCGACTGGTACTTTCAAGTCCATGTTCATCATCGACAACGGCAACGTGTATATCGATACCGCCTTCATCAAGAACGGCACCATTACAAACGCAATGATTGGAAACGTGCTTCAATCCAATAATTATGTTCCTGGTGTTTCTGGCTGGCGTATTGATAAAGCTACCAACACCATTGAAATTAACAGCCCGCTGCCCGGAGGCGGACGTCTTACTATCGACTCTCAAGCGGTAGTTGTGTACGACCCCAATGGGATTGACCGGGCACGCTTTGGATGGATTCCATAA

Tertiary structure

PDB ID
6c4b2735b35545197ee0275ea59be763b38296a8d64ee06112b0ac3351beaa84
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2268
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank