Protein

View in Explore
Genbank accession
UKH48749.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKADDYRQLRAATVADDLFIANLSVKPEADRTDVKGVDPNKTGWLYIKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 92014,76080 Da
isoelectric point:5,98648
aromaticity:0,10775
hydropathy:-0,32143

Domains

Domains [InterPro]
IPR058003
TTP
1–816
IPR058003
DC_0058
STR
1–826
DC_0058
UKH48749.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKH48749.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9880
Central domain 141 339 200 0,2404
C-terminal 340 826 486 0,3080
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage L5
[NCBI] 		2913129 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKH48749.1 [NCBI]
Genbank nucleotide accession
OL754589 [NCBI]
CDS location
range 26016 -> 28496
strand +
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGTGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCGACGATTACAGGCAGCTACGGGCCGCTACGGTGGCTGACGACCTGTTCATCGCCAACCTGAGCGTGAAGCCTGAGGCCGACCGCACCGATGTCAAGGGTGTGGACCCCAACAAGACTGGCTGGCTGTACATCAAGGCAGGGCAGTATTCGAAGGCATTCTCCCTGACCATCAAGGTCAAGGACAACGCCACGGGCACCACCTACAGTCACACGGCCACCTACGTGACACCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAGCTCTACGGCAAGTTCTTCGGGGCGCCGGAGTACACCCTGCCCAACTCCACGAAGAAATACCCGAAGGTAGACCCGGACGCCAACGCGGCAACCATAGCCGGTTACCTCAACCAACGGGGCGTGCAGGACGGGTACATCGCGTTCCGTGGCGACGCCGATATCCACGTTGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGACCTGCCGGCCTTGCTGCCGGGAGTCGGTGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCCACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGTTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGTAACAATCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCAGCCCAGGGGAGCCTGACTGAGCCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGGACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTATACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCTGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTGCAGAACGCGTTTCATCGCTGGACGTTGCGACATCAGATCATCGGCGCCTACTTCACTGGCGACAACCTGATGGTCCTGATTCAGAAGGGCCAGGAGATCGCCCTGGGACGTATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTATACCAGCTCCAGCCCGTGGCCGGTGCCTACATGGAACGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTAGTCGGTGCCGTGTACGTGGTCGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCACCGGTGCTACGGGACCACAACGGGCTGCCCATGACCGCGACCCGCGCAGTGCTCCACCGGTACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGCCCTAACCAGCCGTGGTACGACACGACGCCCCTGCGGCTGTTCAGTCGGCAACTCAACGCCGGCGAGCCACTGGTGGATAGTGCCGTGGTGCCGCTGCCGGCCAGGGTGGACATGGCCACGTCCAAGTTCGAGTTGAGCTGCCATAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc393aca2ef51315ee6383d7764b08e31382e8ba63e7ec21fa2f7f53d2ae697e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8513
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Phikmvvirus phage that infects Pseudomonas aeruginosa Yang,L., Wang,W., Guo,Y., Tang,K. and Wang,X. 2017-03-30 — GenBank