Protein

View in Explore
Genbank accession
AAX44404.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVNFPNSPSTNDTHTENGYTWKWDGTTWIIQSLAPPGPTGPSGPSGPSGPSGPSGPPGPPGPTGGSGSSTFVGLTDTPSTFTADKFVKVNSSGNALEWTDAPTNGLPIVNVADFGALPGASGATNRTSIEAAINSLASTGGLVYIPTGTYDITGTILIDQGVMGDGGGVSIIGPTQNYRITAADTEGVCLRSTDAGSDIIKVNNVRNVTFANLAFDHKEGTSRTGGNAVHFYSNVNTQQIRMDRIYIRRQFGAIKVDGHSIATFRDIEIRDIVNEGGSFGMLFSASAGGSERQDQIRCENVIIDGVISGSPHTSAVGLWVKDFVNSIWFLNCAVLRCNKGFLMDSTVPSGSTGNPGSFFRINDCDFDTNNSYGIEIAGGSFIWINNPYISSNFVNGLRVSSTFTGVLRVNAADCRGNRQHGIYIDSQDHKKIFIRDSQCSNNSATNTNQYDGLAFYDSNGTNQSDIHIDGGQYGGDIMGSTDGGNSTSTPQRYGIAAVNNSKYDRVTINNVDCTGNRTGTVQFNPNNGSDNYIHNVIGFHGTHSGAH
Physico‐chemical
properties
protein length:548 AA
molecular weight: 57859,70820 Da
isoelectric point:5,31202
aromaticity:0,08577
hydropathy:-0,34836

Domains

Domains [InterPro]
DC_2298
STR
3–107
DC_2298 IPR011050
IPR012334
STR
110–547
IPR012334
AAX44404.1
1 548
Architecture
STR
STR 3-547 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAX44404.1
1 548
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,8686
Central domain 120 537 419 0,9889
C-terminal 538 548 10 0,3367
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-537
C-terminal
538-548

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM2
[NCBI] 		268746 Uroviricota > Caudoviricetes > Pantevenvirales > Salacisavirus > Salacisavirus pssm2
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX44404.1 [NCBI]
Genbank nucleotide accession
AY939844 [NCBI]
CDS location
range 22591 -> 24237
strand +
CDS
ATGGCAGTAAATTTTCCAAATAGTCCTTCAACTAACGATACCCACACCGAGAACGGTTATACATGGAAGTGGGATGGAACTACTTGGATAATTCAATCTCTTGCTCCTCCAGGTCCTACAGGTCCAAGTGGTCCATCAGGTCCAAGTGGTCCAAGTGGTCCTAGCGGTCCTCCAGGTCCTCCAGGTCCAACAGGAGGTTCTGGGTCTTCTACTTTTGTAGGTTTAACAGATACACCATCTACCTTTACTGCTGATAAGTTTGTAAAAGTAAATTCTAGTGGTAATGCTTTAGAATGGACTGATGCTCCTACTAATGGATTACCTATAGTTAATGTTGCAGATTTTGGAGCACTTCCAGGTGCTAGTGGAGCAACAAATAGAACTAGTATTGAAGCAGCAATTAACTCATTAGCATCTACGGGAGGATTGGTTTATATTCCTACAGGAACTTATGATATAACAGGAACTATATTAATAGATCAAGGTGTTATGGGTGATGGTGGTGGTGTAAGTATCATCGGTCCAACTCAGAATTATAGAATTACTGCTGCTGATACTGAAGGAGTTTGTTTGAGATCTACTGATGCTGGTAGTGATATAATAAAAGTAAATAATGTAAGAAATGTAACTTTTGCCAATCTAGCATTTGATCATAAAGAAGGCACATCTAGAACTGGTGGAAATGCTGTTCATTTTTATTCTAATGTGAATACTCAACAGATTAGAATGGATAGGATTTATATCCGAAGACAATTTGGTGCTATTAAAGTAGATGGGCATTCAATCGCAACATTTAGAGATATAGAGATTAGAGATATTGTAAATGAAGGTGGTTCCTTTGGAATGTTATTCTCTGCTTCTGCTGGTGGATCAGAAAGACAAGATCAGATAAGATGTGAGAATGTTATTATTGATGGTGTGATTAGTGGAAGTCCACATACATCGGCAGTAGGATTATGGGTTAAAGATTTTGTAAATTCAATATGGTTCCTTAATTGTGCTGTTCTTAGATGTAATAAAGGATTCTTAATGGATTCAACTGTTCCTAGTGGATCAACAGGTAATCCTGGTTCATTCTTTAGAATAAATGATTGTGATTTTGATACAAATAATTCATATGGTATTGAGATTGCTGGTGGTAGTTTCATTTGGATTAATAACCCATATATAAGTAGCAATTTCGTTAATGGTTTGAGGGTTAGTAGTACTTTTACGGGTGTATTAAGAGTAAATGCTGCTGACTGTAGAGGTAATAGACAGCACGGAATTTATATTGATTCACAAGATCATAAGAAGATCTTTATAAGAGATTCGCAGTGCTCTAATAATTCTGCAACTAATACTAATCAATATGATGGTCTTGCTTTTTATGATTCTAATGGAACTAATCAATCAGATATTCATATTGATGGTGGACAGTATGGTGGAGATATAATGGGATCAACTGATGGTGGTAATAGTACTAGCACACCTCAAAGATATGGTATAGCAGCAGTTAATAACTCAAAATATGATAGAGTTACTATTAATAATGTAGATTGTACTGGAAATAGAACTGGTACAGTTCAATTTAACCCTAATAATGGATCTGATAATTACATTCATAATGTTATCGGATTCCACGGAACACATTCAGGTGCTCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bfa3bbbfadd1a244bca080d8f3cc98e965bbaa162b2e9c32b1a397bf5bc27b56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50