Protein
View in Explore- UniProt accession
- G3FFN0 [UniProt]
- Protein name
- Outer capsid protein
- RBP type
-
TSPTSP
- Protein sequence
-
MAIYFENQEVLNIHMGGTHIQEVTVNGVKVAALPEVVSQPQGGTITTKQTLTLTAGVETLGSSVSYQWYLNNGEVSGANSSSYVFVPPAAGNYSIKCRATSFGGFTETQVAGVTVNQAQLAWTNVSTFVASSVPFLVKAGNNLLLLSRNSAYSTDGGVTWVALPEGLGTGVPSFQASPRGVASDGNTVVVVYEGGYNTKSTNGGVSWTSLPRFYFSGTSAVNINCVAVSGNTIVQAGSVGYARRSTDGGSTWSDLPRGLGMRTDGTITKMHGRGNVIVAGNSETQGSDPTTLTISTDGGATWTGKDIGSPDGLGSRLAMMCHVVDNSVVIYGMQMHTAISRNGGSTWTWLPSGLNAGSGSSNLSMLCMDSVGDTIVAGTYNGSAAVSYDKGLSWSAVPTKGLGTGRTGDAVFTMCAFPDGRFFAGLGSSTAYVGKGQ
- Physico‐chemical
properties -
protein length: 437 AA molecular weight: 44997,64970 Da isoelectric point: 6,20383 aromaticity: 0,08238 hydropathy: 0,00275
Domains
Domains [InterPro]
DC_1032
ATT
1–76
ATT
1–76
IPR013783
STR
34–115
STR
34–115
cd00146
ENZ
36–115
ENZ
36–115
IPR000601
ENZ
41–101
ENZ
41–101
1
437
Architecture
ATT 1-76 | STR 77-433 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
437
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 122 | 122 | 0,6200 |
| Central domain | 123 | 426 | 305 | 0,8748 |
| C-terminal | 427 | 437 | 10 | 0,5681 |
Note: Constraints were applied during segmentation.
Fixed 39 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 39 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-122
1-122
Central
123-426
123-426
C-terminal
427-437
427-437
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Vibrio phage phiVC8 [NCBI] |
1076759 | Uroviricota > Caudoviricetes > Enhodamvirus > |
| Host |
Vibrio cholerae O1 [NCBI] |
127906 | Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
e60a8e17c9974f396d3dfaef9ed63eccd76e2ae5132a51e1e0dda2949c62ed8d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50