Protein

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Genbank accession
QXN68745.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFDNAVIKNPRTNNKAIYIDLDIDCDGEIYPYTATPTDTEVSSVVLYHRALAGDFGEVVILDRDFAAENEAIKSERIGEADRQIALLNDAIELDMATEGEKEAFTTWRKYRVLLNRIDTNGHDIEWPTPPQ
Physico‐chemical
properties
protein length:131 AA
molecular weight: 14846,33690 Da
isoelectric point:4,38151
aromaticity:0,08397
hydropathy:-0,45115

Domains

Domains [InterPro]
DC_0270
STR
1–131
DC_0270
IPR003458
RBD
64–131
IPR003458
QXN68745.1
1 131
Architecture
STR
STR 1-131
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Hafnia phage yong2
[NCBI] 		2859519 No lineage information
Host Hafnia paralvei
[NCBI] 		546367 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXN68745.1 [NCBI]
Genbank nucleotide accession
MZ516527.1 [NCBI]
CDS location
range 18741 -> 19136
strand +
CDS
ATGTTTGATAATGCGGTGATAAAAAATCCGAGAACAAATAATAAAGCGATTTATATAGATCTTGATATCGATTGTGATGGTGAAATATACCCCTACACAGCAACGCCTACGGATACAGAGGTTAGCAGTGTTGTACTATACCATCGAGCATTAGCTGGTGATTTTGGCGAAGTGGTAATTTTAGATAGGGATTTCGCAGCAGAAAATGAAGCGATAAAAAGTGAACGGATAGGCGAAGCAGATAGGCAAATCGCGCTTTTGAACGATGCTATAGAATTGGATATGGCGACCGAAGGTGAGAAAGAGGCGTTCACTACATGGCGAAAATACAGAGTTTTGTTAAATCGTATCGATACCAACGGGCATGATATTGAGTGGCCAACACCTCCCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
62abcebaa423eedc0971064544346fdd9403016e235d05935a18a2a815cae671
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of a novel active prophage of Hafnia paralvei Pan,L., Li,D., Lin,W., Qin,W., Xu,L. and Tong,Y. — — GenBank