Protein

View in Explore
Genbank accession
YP_009900967.1 [GenBank]
Protein name
chaperone of endosialidase
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence Phold
Probability 1,00
Protein sequence
MATVTVIPSDITKLKNEVSTLKQDVAGKASTTDVDNKLKLYLKQTDLSSELDSGRYSGSFYPLTGNDAFYLFNLNTTAQSANLWLDPNAGVSQVLRSTSSSRYKSSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAKGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLE
Physico‐chemical
properties
protein length:224 AA
molecular weight: 25044,97330 Da
isoelectric point:5,03817
aromaticity:0,08036
hydropathy:-0,39286

Domains

Domains [InterPro]
IPR030392
99–206
IPR030392
Coil
192–219
Coil
YP_009900967.1
1 224
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage JK16
[NCBI] 		2591057 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009900967.1 [NCBI]
Genbank nucleotide accession
NC_049814 [NCBI]
CDS location
range 48828 -> 49502
strand -
CDS
ATGGCTACAGTAACTGTTATACCTAGTGATATAACGAAGCTGAAAAATGAAGTTTCAACACTAAAACAGGATGTCGCAGGAAAAGCATCAACTACTGATGTTGACAATAAGTTGAAGCTGTATCTAAAACAAACTGATCTATCATCCGAGTTGGATAGCGGAAGGTATAGTGGGAGTTTTTACCCCCTAACTGGTAACGATGCATTTTATTTATTTAATCTTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTGTCGCAAGTTTTACGATCCACTTCCTCTTCTCGTTATAAGAGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTTTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGAAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGAATAA

Tertiary structure

PDB ID
807c152f04e7289cca7e87e8014a6e344d46449edef0b7a7b75e64b06ef30991
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A quest of great importance - developing a broad spectrum Shigella ssp. and Escherichia coli phage collection Kaczorowska,J., Casey,E., Neve,H., Noben,J.-P., Lugli,G.A., Ventura,M., van Sinderen,D. and Mahony,J. 2019-09-26 — GenBank