Protein

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Genbank accession
AXF40735.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
METPLNNTYKHIADAAQYISFNPTDTSFPATVVDVQAALALTSPTTYATATTAGVVKIATKDEVLAGVDNTKMVTPFTLNERMKYPDATTTVKGLVTLATNAEAQAGAITSNKAINPASLKYTLDWWWDNKLASESAQGVIKLSTQQAAQAGVDDSTAMTPLKVKQAIAAATAQIPQPVQATETAPGIVQLATIGQAQQGTLRDGYAISPYTLQRITGSLTTRGLVQAATLAQANTGADDTLYISAKGFKTYNATTTNYGTVKLTDTPGTTGAGVVLSSNAKVLSTVSTGTQTVTGIVNFTETLQLQGQPVANQKFVKDSIPIGVMMEWFGDSAPPGGMWALCDGGAESKAARPELFAVIGYKFGGSGDTFYRPDMRGLYARGAGRGKDIIANTGYDEFNKPLLGNGVDGGVVGQVQKQQIREHKHIVSWGENRRETPNFPFGGTQLSKYWGTAGKEDHDNGWMFSNDGTEFEPASVRTEYSTVNPKELIGTETRPWSMSVNYIIKVA
Physico‐chemical
properties
protein length:508 AA
molecular weight: 54059,01380 Da
isoelectric point:5,93049
aromaticity:0,08071
hydropathy:-0,26594

Domains

Domains [InterPro]
IPR037053
311–377
IPR037053 IPR044916
SSF88874
317–507
SSF88874
IPR011083
324–379
IPR011083 IPR027448
AXF40735.1
1 508
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_ApiM_fHyAci03
[NCBI] 		2269366 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF40735.1 [NCBI]
Genbank nucleotide accession
MH460829 [NCBI]
CDS location
range 93986 -> 95512
strand +
CDS
ATGGAGACACCACTTAATAATACATACAAACACATTGCAGATGCAGCACAATATATCTCATTCAATCCAACAGATACAAGTTTTCCTGCAACTGTAGTAGATGTTCAAGCTGCATTGGCTCTTACTTCTCCTACTACATACGCCACTGCCACTACCGCAGGTGTCGTCAAAATTGCTACCAAAGATGAAGTTTTAGCAGGGGTTGATAACACAAAAATGGTGACACCATTCACTCTAAATGAGAGAATGAAATATCCTGATGCCACTACAACAGTTAAAGGGCTTGTAACTTTAGCTACTAATGCAGAGGCTCAAGCCGGAGCCATAACTTCAAATAAAGCTATCAATCCAGCAAGTTTGAAATACACACTTGATTGGTGGTGGGACAATAAATTAGCATCTGAATCTGCACAAGGTGTTATTAAATTATCTACACAACAAGCTGCACAAGCCGGAGTAGATGATTCTACCGCAATGACACCATTAAAGGTCAAACAAGCCATTGCAGCTGCCACAGCACAAATTCCGCAACCTGTACAAGCTACTGAGACTGCACCGGGTATAGTTCAACTTGCAACAATTGGACAAGCACAACAAGGCACTTTAAGAGATGGATATGCAATCTCGCCATATACTCTTCAACGTATTACAGGAAGTCTTACAACACGAGGATTAGTCCAAGCTGCAACTTTAGCACAAGCTAACACAGGGGCGGATGACACCTTATACATTTCTGCTAAAGGATTCAAAACATATAATGCTACCACTACAAATTATGGTACAGTTAAATTAACCGATACACCTGGGACCACCGGTGCTGGTGTCGTGTTAAGTTCTAATGCTAAAGTATTAAGCACTGTATCTACCGGTACACAAACTGTCACAGGCATTGTTAATTTTACTGAAACACTTCAACTTCAAGGACAACCAGTAGCCAATCAAAAATTTGTTAAAGATTCTATTCCGATTGGCGTCATGATGGAATGGTTCGGTGATTCAGCGCCTCCTGGAGGTATGTGGGCGTTATGCGACGGTGGAGCCGAATCAAAGGCTGCACGCCCAGAGCTTTTTGCGGTTATTGGCTATAAATTCGGCGGTTCTGGTGATACATTCTATCGCCCAGATATGAGAGGTCTTTATGCTCGTGGTGCTGGGCGTGGTAAAGACATCATTGCAAACACCGGATATGATGAGTTCAATAAACCTCTATTAGGTAATGGTGTAGATGGCGGTGTTGTTGGACAAGTTCAAAAGCAACAAATTCGTGAACATAAACACATTGTTTCTTGGGGCGAAAATCGTAGAGAGACGCCTAACTTCCCATTTGGTGGCACACAGTTAAGTAAATATTGGGGGACCGCTGGTAAGGAAGATCATGATAATGGTTGGATGTTCTCTAACGATGGAACAGAATTTGAACCTGCATCAGTGCGGACCGAATATTCTACTGTCAACCCTAAAGAGTTAATTGGAACAGAGACACGCCCATGGAGCATGTCAGTAAACTATATTATTAAGGTGGCTTAA

Tertiary structure

PDB ID
6f61461fcc1481a5e7b116e80895cbebbcc401b757607c52ad78287e36103123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of vB_ApiM_fHyAci03, a novel lytic bacteriophage that infects clinical Acinetobacter strains Pulkkinen,E., Wicklund,A., Oduor,J.M.O., Skurnik,M. and Kiljunen,S. 2019 — GenBank