Protein

View in Explore
Genbank accession
YP_009856752.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,97
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSIIPTLEAKLTGETWYRMVASNDATQNVKVKADYVCDGTDDQTEIQNAVDAAFAENGGIVKLSSGNFNLSAPITLHPTVTLLGQHGEQIFNPDQSVTSSRLVITAGFVGGAAIVLLGQTAAGYANKSAEQRIYAITILGDDAPAESTASRVATTSMESCCGMSASSGLPGRNLHLHRERLSAVLLDL
Physico‐chemical
properties
protein length:188 AA
molecular weight: 19725,95510 Da
isoelectric point:4,94541
aromaticity:0,04787
hydropathy:0,01862

Domains

Domains [InterPro]
DC_0347
STR
3–176
DC_0347
IPR011050
STR
25–95
IPR011050
IPR012334
STR
32–177
IPR012334
YP_009856752.1
1 188
Architecture
STR
STR 3-177 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009856752.1
1 188
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,6412
Central domain 43 177 136 0,7246
C-terminal 178 188 10 0,9728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-177
C-terminal
178-188

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage JXY1
[NCBI] 		2708562 Uroviricota > Caudoviricetes > Beephvirinae > Manuelvirus JXY1 >
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009856752.1 [NCBI]
Genbank nucleotide accession
NC_048854 [NCBI]
CDS location
range 2225 -> 2791
strand -
CDS
GTGTCCATCATCCCAACCCTTGAGGCCAAGCTCACTGGCGAGACCTGGTACAGGATGGTCGCATCTAACGATGCGACCCAGAACGTCAAGGTCAAGGCCGACTATGTGTGTGATGGTACTGACGACCAGACCGAGATCCAGAACGCCGTCGATGCGGCGTTCGCTGAGAACGGCGGCATCGTCAAGCTATCCTCGGGTAACTTCAACCTGAGCGCACCTATCACTCTGCATCCGACCGTCACCCTACTGGGGCAGCACGGTGAGCAGATCTTCAACCCAGACCAGTCGGTCACTAGCAGTAGGCTGGTGATTACTGCGGGGTTCGTCGGCGGAGCGGCCATCGTCCTACTAGGGCAGACCGCAGCAGGGTACGCGAACAAGAGTGCAGAGCAGCGAATCTACGCAATCACGATCCTCGGAGACGATGCGCCAGCAGAATCCACGGCATCCAGGGTAGCGACTACATCCATGGAGTCGTGCTGCGGGATGTCGGCATCGTCAGGGTTACCGGGAAGGAATCTACACCTTCACCGAGAACGGCTCTCAGCCGTTCTCTTGGACCTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
73b41abe604fb48a73215ba9c77cdca9842bfe64d74f49cd6c08e221c17558ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50