Protein

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Genbank accession
UPW39034.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTRISKTRALATIKSLEAKIRKATEQQLLIAVGEGKDKNKVVVGAAIEVDDLSARIKADFQSLLDMMSQRDCIKAALIKSNAETIVEIGSRKMTVAEAIEAKRSMELKAQLLANMRKQFHAATVKFNTQKAQFDAKYERLQDSMATRDKKTSEDEVKMQLNLLELKNTPFLIDPLELEKLIKQHDEEYQDFATNVDFVLSESNASTFIEVE
Physico‐chemical
properties
protein length:212 AA
molecular weight: 23928,28900 Da
isoelectric point:6,23810
aromaticity:0,04717
hydropathy:-0,38302

Domains

Domains [InterPro]
Coil
7–27
Coil
UPW39034.1
1 212
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO40
[NCBI] 		2918880 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW39034.1 [NCBI]
Genbank nucleotide accession
OM386660.1 [NCBI]
CDS location
range 31188 -> 31826
strand -
CDS
ATGACTACTCGTATTTCTAAAACTCGCGCTCTGGCAACTATCAAATCTCTGGAAGCTAAAATCCGTAAAGCTACTGAACAACAGCTTCTGATCGCTGTTGGTGAAGGTAAGGATAAAAATAAGGTTGTAGTTGGCGCTGCAATCGAAGTAGACGATCTATCTGCTCGTATTAAGGCAGATTTCCAATCTCTCCTAGATATGATGTCCCAGCGTGATTGTATCAAAGCTGCTCTGATTAAGAGCAATGCGGAAACAATCGTTGAGATTGGCTCTCGTAAGATGACTGTTGCGGAAGCAATTGAAGCTAAGCGTTCTATGGAGCTTAAAGCTCAGCTGTTGGCTAACATGCGTAAGCAGTTCCATGCCGCTACGGTTAAGTTTAATACGCAGAAAGCACAGTTTGATGCTAAATATGAGCGTTTGCAGGATAGCATGGCTACCCGCGATAAGAAAACTTCCGAAGATGAAGTTAAAATGCAGCTCAACCTGCTAGAACTCAAGAATACTCCATTCTTGATTGATCCGCTGGAACTGGAGAAGCTGATTAAGCAGCATGACGAGGAATACCAGGACTTTGCAACAAATGTTGACTTTGTTCTGTCCGAGTCTAACGCCTCTACCTTTATTGAAGTAGAGTAA

Tertiary structure

PDB ID
7edb1508ebe4148b9baf5236ab8585052d71802d0f9528696c226b03e66b78dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank