Protein

View in Explore
Genbank accession
QNO00036.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTFSVHGSATGGYAVGPVENAFEGVDLAAAQAARDAYFASNPTKLAAYDSNPFYLIRLTYGATTNAEYRMGGQWIDYTPFLQGLPGEVASLANVPVGELPYKTLDGTFAGSRMRVLDDGSLLAPPGFGVESGSVKFGDVLLLSEAAGFLSISNLINERPYTILDYYTPRDAASAVPTAFMASAPAFGFVAQPDDSVNMTDEPLLFDYTIQNTSRTYSLFMRAFAAMSNVRIKITQISNGVALKYLPSKEAWETEEGGLEWIIGDNTFDFGDTPLIFNTGQNIRFEIRATTMSLKGNASGIPYFGGSDQLGEFRDVLMADQYTATDVRDKLATLTGTNRLPMSAIKDGVVSVAGRLGAIVLTASDVAGLSTVATTGAYSSLSGLPFIPTNTSQLTNGANFITAAQAPVQSVQGYTGAVVLARSDIGLGNVDNTSDINKPTSTAQQTSIDVKMSQHNAAVDPHPQYTTVAEASAAAPIQSIVNGRGITASTLTGVTTVGSTEFPLVFNGSGAASSPKIWYGTATSDVNGVFIVDISSAGFTLAPTVTVSATLTTVTLTDRAWATLASVTATTASGYTLRGINLSGNGATVRLAPNTTVNIMAIGI
Physico‐chemical
properties
protein length:603 AA
molecular weight: 63042,93550 Da
isoelectric point:4,61978
aromaticity:0,08789
hydropathy:0,10415

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa300
[NCBI] 		1460362 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNO00036.1 [NCBI]
Genbank nucleotide accession
MT670418.1 [NCBI]
CDS location
range 31452 -> 33263
strand +
CDS
ATGACATTCTCTGTTCACGGTAGTGCAACTGGCGGATACGCTGTTGGCCCAGTAGAGAATGCTTTCGAAGGTGTTGACCTTGCTGCTGCACAGGCAGCACGTGACGCATACTTCGCATCCAATCCAACTAAACTGGCTGCTTACGACAGCAATCCATTCTATCTAATCCGTCTAACATATGGTGCTACAACAAACGCTGAGTACCGTATGGGAGGCCAGTGGATCGACTACACACCTTTCCTACAAGGATTGCCGGGAGAAGTTGCTTCTCTGGCTAACGTGCCTGTAGGTGAGCTTCCATACAAGACACTTGATGGTACATTCGCAGGTTCTCGTATGCGTGTGTTGGATGATGGTTCTCTCCTAGCTCCACCGGGCTTTGGTGTTGAATCTGGTTCTGTTAAGTTTGGTGACGTACTGTTGCTATCTGAGGCTGCTGGATTCCTATCTATCAGCAATTTGATTAATGAACGTCCATACACAATCCTTGACTACTACACACCACGTGATGCCGCCTCTGCCGTTCCAACAGCATTTATGGCTTCTGCACCAGCATTCGGCTTTGTGGCACAGCCTGATGACAGTGTTAACATGACAGATGAACCACTGTTGTTTGACTACACAATCCAGAACACTTCCCGCACTTACTCCCTGTTTATGCGTGCATTTGCAGCAATGTCTAACGTCCGAATCAAGATTACCCAAATCTCTAACGGCGTTGCACTGAAGTATCTGCCATCTAAAGAAGCTTGGGAAACTGAGGAAGGTGGGCTTGAGTGGATTATTGGAGACAATACATTCGACTTTGGTGATACACCGCTTATCTTCAACACAGGACAAAACATCAGATTTGAAATCCGTGCCACAACTATGTCGTTGAAAGGTAACGCATCTGGCATTCCATACTTCGGAGGCTCTGACCAACTAGGTGAGTTCCGTGACGTGCTTATGGCTGACCAGTATACAGCAACTGACGTTAGAGACAAGCTGGCAACACTCACCGGCACCAACAGACTACCAATGAGCGCCATTAAAGATGGTGTTGTAAGTGTCGCTGGGCGCCTCGGTGCGATTGTACTGACAGCATCTGACGTAGCTGGACTGTCCACTGTTGCAACAACTGGGGCTTACTCTAGCCTGTCTGGTCTGCCGTTCATTCCTACAAACACAAGCCAGCTAACCAACGGAGCCAACTTCATCACTGCTGCTCAAGCTCCAGTGCAAAGTGTCCAAGGTTACACTGGTGCTGTTGTTCTCGCAAGGTCGGATATTGGACTTGGAAACGTAGACAACACGTCTGACATTAACAAACCAACGTCTACAGCACAGCAAACATCCATCGACGTGAAGATGTCTCAGCACAACGCTGCTGTTGATCCTCACCCACAATACACAACTGTTGCCGAAGCTTCTGCTGCGGCTCCAATCCAGAGTATTGTTAACGGTAGAGGTATTACCGCATCGACTCTTACTGGTGTAACAACCGTAGGATCGACTGAGTTCCCTCTTGTGTTCAATGGTTCTGGTGCTGCTTCTTCACCAAAGATTTGGTATGGAACTGCAACGTCCGATGTAAACGGAGTGTTCATTGTTGATATCTCTTCCGCTGGATTTACGCTAGCTCCAACTGTCACTGTGTCTGCTACCCTTACAACAGTGACTCTAACTGACAGAGCATGGGCAACACTCGCTTCTGTAACTGCAACAACCGCATCTGGTTACACCCTACGAGGCATCAACCTATCGGGTAACGGGGCAACCGTAAGGCTAGCTCCAAACACAACAGTCAATATCATGGCTATCGGTATTTAA

Tertiary structure

PDB ID
b107cbc2db61dd33df379ef069841c71701cc9e4d275871825e54cada710b345
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5628
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank