Protein

View in Explore
Genbank accession
QDH46374.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVTGSFESVYRGVSQQVPQARRSGQMAEQVNMISDPVRGVVRRHGSQALHGFQISGADMNATQLAELARKYTTMPYHCNGKEYELFYSKEGVTGYPGAIPVVAYDKAKQEIMPTVLYGGLANLLTSNGVSSMVNIGKFVFIAVNGFSPTYHFATNMVDTAAQRVGVLWIRNGGFSRTYTLKLTMVDGSVKTITYTTPAATYQGTLNTSDIPYDETKPWLYQQAVANRTNAYNTAVTQHIATATAAIAPDAIAREMYTRMMAAGIAANNVAADGAYVLWNQNANVAFASLDDGGDDSYARVNVHSVDTVEKLVPKAYNGMLMKIAAKRSNNKDAFYMRATTKDGSMFGEVVWKEAAAQVIQPQQIFAIGYIHSGKLYIGGTPAELNTATGNAANCPAFKDSVVGDSNSQPLPQLFGRNIDYLGVFQDRLIIGTGSTLMCSRPGDYFNWFRQTVLDVLDNDPIEMYALGSEDDTIKWDTSFDRNHVLFGRKFQYVLPGRVALTPKNPSIQIMSANEDAIRAQPKSSGNFVFFAKDASVKGSVHQIQLGATADTAEAYECSQQLDRYLKGYPIQLLCTTSPYNVFVRTYDHPNGFYCYSYLDAMGGGERLYDSWSRWEWNPMLGACMGIAQYQGDILCMTVRSRPGKGSWMFMDLFRLDTRLSSYPYLDSWRWYKDVAQNSLWADAGAHNEASIAYLQNHGYYMLGSKWATVNANMPWYDEVGHREHLTFGWEFESSLELTNPYLRDRNDKAITNGRLTLLNYSITLHDSGGLTACREDADRKICTTTFDGRLLTRKQNIIGAAPILDTTVRVPVGKEVRECKVTLSAMTWLPFGIASIEWTGHWFNNARRV
Physico‐chemical
properties
protein length:851 AA
molecular weight: 94600,85550 Da
isoelectric point:7,22585
aromaticity:0,11281
hydropathy:-0,27133

Domains

Domains [InterPro]
IPR058003
1–850
IPR058003
QDH46374.1
1 851
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh4
[NCBI] 		2591028 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH46374.1 [NCBI]
Genbank nucleotide accession
MK838110 [NCBI]
CDS location
range 4147 -> 6702
strand +
CDS
ATGGCCAAGGTTACAGGCTCTTTCGAGTCGGTGTATCGCGGGGTCTCCCAGCAGGTTCCGCAGGCCCGCCGCTCTGGCCAGATGGCCGAACAGGTCAACATGATTTCCGACCCGGTGCGTGGGGTTGTTCGCCGCCACGGCAGCCAAGCCTTGCACGGATTCCAGATTAGCGGTGCAGACATGAACGCCACTCAGCTGGCGGAGCTGGCCCGCAAGTACACCACCATGCCGTACCACTGCAACGGCAAGGAGTACGAGCTGTTCTACTCCAAGGAGGGGGTCACAGGTTATCCCGGTGCCATCCCTGTGGTGGCATACGATAAGGCCAAGCAGGAAATAATGCCTACCGTGCTCTACGGTGGGCTGGCCAACCTGCTGACCTCGAACGGCGTGTCCAGCATGGTGAACATTGGCAAATTCGTGTTCATCGCCGTGAACGGGTTCTCGCCGACCTACCACTTCGCTACCAACATGGTGGACACAGCGGCTCAGCGTGTGGGTGTGCTGTGGATTCGGAATGGTGGGTTCAGCCGGACGTACACGCTCAAGCTGACCATGGTGGATGGTTCAGTGAAGACGATAACCTACACCACACCGGCCGCCACGTATCAAGGCACGCTTAACACCTCCGACATCCCGTACGACGAGACTAAGCCTTGGCTGTACCAGCAGGCAGTGGCCAACCGGACCAACGCCTACAACACGGCAGTGACACAGCACATCGCCACGGCGACCGCTGCAATCGCACCGGATGCCATCGCTCGCGAAATGTATACCCGCATGATGGCTGCCGGCATTGCAGCGAACAACGTAGCGGCTGACGGTGCCTACGTCCTGTGGAACCAGAACGCCAACGTGGCCTTTGCCTCGCTGGATGATGGTGGTGACGATTCCTATGCCCGTGTGAATGTGCACTCGGTCGATACCGTAGAGAAGCTGGTCCCCAAAGCCTACAACGGCATGTTGATGAAGATTGCTGCCAAGCGGTCGAACAACAAGGACGCCTTCTACATGCGGGCCACCACGAAGGATGGCAGCATGTTCGGGGAGGTGGTGTGGAAGGAGGCGGCAGCACAGGTTATCCAGCCGCAGCAAATCTTCGCCATAGGCTACATCCATTCCGGGAAGCTGTATATCGGCGGAACACCGGCGGAGCTCAACACGGCTACCGGTAACGCGGCCAACTGCCCAGCGTTCAAGGATAGCGTGGTCGGCGATTCGAACTCCCAACCGCTTCCCCAGCTGTTCGGGAGGAACATAGACTACCTCGGCGTGTTCCAAGACAGGCTAATCATTGGCACTGGCTCTACGCTGATGTGCTCCCGCCCCGGCGACTACTTCAACTGGTTCCGACAGACGGTGCTGGACGTGTTGGACAACGACCCCATTGAAATGTATGCACTTGGTTCCGAGGACGATACCATAAAGTGGGATACCTCGTTCGACCGCAATCACGTCCTGTTCGGCCGCAAGTTCCAGTACGTGCTCCCCGGCCGGGTGGCGCTGACCCCGAAGAACCCCTCCATCCAGATTATGTCTGCGAACGAGGATGCGATTCGTGCCCAGCCCAAGTCCTCTGGCAACTTCGTGTTCTTCGCCAAGGACGCCAGCGTCAAGGGCTCGGTTCACCAAATCCAGCTCGGTGCCACGGCGGACACGGCCGAGGCGTACGAGTGCAGCCAACAGCTGGACCGCTACCTCAAGGGTTACCCGATTCAGCTGCTCTGCACCACGTCGCCCTACAATGTGTTTGTGCGAACCTACGACCACCCCAACGGGTTCTACTGCTACTCCTACCTCGACGCCATGGGCGGAGGTGAGCGGCTGTACGACAGCTGGAGCCGGTGGGAGTGGAACCCGATGCTCGGGGCCTGCATGGGCATCGCTCAGTATCAAGGCGACATCTTGTGCATGACGGTGCGTAGCCGTCCCGGAAAGGGCTCATGGATGTTCATGGACCTCTTCCGACTGGACACCCGACTCTCGTCCTACCCGTATCTGGACAGCTGGCGATGGTATAAGGACGTTGCGCAGAATTCCCTGTGGGCCGATGCCGGTGCACACAATGAGGCCAGCATCGCCTACTTGCAGAACCACGGCTACTACATGCTCGGCTCGAAGTGGGCCACGGTTAATGCGAACATGCCGTGGTACGACGAGGTGGGGCACCGGGAGCACCTGACGTTCGGGTGGGAGTTTGAATCCTCGCTGGAGCTGACCAACCCGTACCTGCGGGACCGGAACGACAAGGCCATCACCAACGGCCGACTCACCCTGCTCAACTACAGCATCACCCTGCACGATTCTGGTGGCCTGACGGCCTGCCGGGAGGATGCAGACCGTAAGATTTGCACCACCACCTTTGACGGCCGCCTCCTGACCCGGAAGCAGAACATCATCGGTGCTGCACCAATCCTCGACACCACGGTGCGGGTGCCGGTAGGCAAGGAGGTGCGGGAGTGCAAAGTAACCCTCTCGGCAATGACTTGGCTACCCTTCGGGATTGCGAGCATTGAGTGGACCGGGCATTGGTTCAACAACGCACGGAGAGTGTAA

Tertiary structure

PDB ID
167f9118cf7216d21aeb3cdf69c8624884369db5003a2115d02a79331808fdf3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank