Protein

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Genbank accession
YP_004508399.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSWAETYKVNSDLQGEPLNFLSYLQDIKLNGLDSYVLFIGNARIWEELYLNSLYLFSDRGIRETVYTAFSETDIDNLFNKSTKLGEQLNAFYRTDIFSLGNADNVVKEMTIEHYNSLEEKFKAGYDRYVTREQEKSTIGAWFNSTFSLDNTDLENLTTIEEILANVEATNAILNNSNAIVALTMCKSSMDAVVASSNAMDLLGQYILRVTTESPVIRAILKNNVIRDAIINSDEAMTQISSNENSVMEIFNDLEATKVLVQNQNSINKILTNNVTVEKIIPNLLEMKYNLQTSLNYINTIKSNIASGKGQIMAITYNEEIFPILKNAVKNYDGMETTRNISQRDIEEKIKISDAILESSIAMATFANNSIIVNKVGDRVGIIESIFSKTVSLNAFMKSTTAINILVNKTTAFTKIANNSTAFNAMLTISENNVTIANNTTAMGIIANNAQAMSTVANNDTSISVFVNNTTAMGIIANSSTAMTKITLTGLALNRMVKSNTAKSILISKNSTLQTYKNNIQNTIQGSTAYFRTITGFADADNNPPQTINSTYVGITYCYGYKGNSYYGIVYHGYNTSIEAGRGNGYKDETKKFITLGGARYDQSGDGYFTYAMYQAI
Physico‐chemical
properties
protein length:616 AA
molecular weight: 68237,15550 Da
isoelectric point:5,10769
aromaticity:0,08929
hydropathy:-0,17078

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD38-2
[NCBI] 		1032362 Uroviricota > Caudoviricetes > Leicestervirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004508399.1 [NCBI]
Genbank nucleotide accession
NC_015568.1 [NCBI]
CDS location
range 21800 -> 23650
strand +
CDS
ATGAGTTGGGCGGAGACATACAAAGTGAATAGTGACTTGCAAGGCGAGCCACTAAATTTTTTAAGTTATTTGCAAGACATAAAACTAAATGGATTAGATAGTTATGTGCTGTTTATTGGAAATGCTAGGATATGGGAAGAATTATATTTAAATAGTTTATATTTATTTTCTGATAGAGGAATAAGAGAAACAGTTTACACAGCTTTTTCAGAAACTGATATTGATAATTTATTTAATAAAAGCACTAAGCTAGGGGAACAATTAAATGCCTTTTATAGAACAGATATATTTAGCTTAGGAAATGCTGATAATGTAGTAAAAGAAATGACTATAGAGCATTATAATTCATTAGAGGAAAAATTTAAAGCAGGGTATGATAGATATGTTACAAGAGAACAAGAAAAGTCAACTATAGGAGCATGGTTTAATTCTACTTTTAGCTTAGATAATACTGATTTAGAAAATCTTACAACTATAGAAGAAATATTAGCAAATGTGGAAGCTACTAATGCAATACTTAATAATAGTAATGCAATAGTAGCTTTAACTATGTGTAAATCAAGCATGGACGCAGTTGTAGCAAGTTCAAATGCTATGGATTTATTAGGTCAATATATTTTAAGAGTTACAACAGAGTCACCAGTCATTAGAGCAATTTTAAAAAATAATGTGATTAGGGATGCGATTATAAATAGTGATGAAGCTATGACACAAATTTCAAGTAACGAAAACTCCGTAATGGAAATATTTAATGACTTAGAAGCTACAAAAGTATTAGTGCAAAACCAAAATAGCATAAATAAAATATTAACTAATAATGTTACTGTTGAAAAAATAATCCCTAATTTATTAGAAATGAAGTATAATTTACAAACTTCTTTAAATTATATAAATACAATAAAATCAAATATTGCTTCTGGTAAAGGTCAAATTATGGCAATAACTTATAATGAAGAAATATTCCCGATTTTAAAAAATGCAGTAAAAAATTATGATGGTATGGAAACCACACGTAATATATCACAACGAGATATTGAGGAAAAAATAAAAATTTCGGATGCAATTTTAGAAAGTTCAATCGCAATGGCAACTTTTGCAAATAATTCTATTATAGTAAATAAAGTTGGTGACCGAGTGGGAATTATAGAAAGTATTTTCAGTAAAACAGTGTCATTAAATGCTTTTATGAAAAGTACAACAGCTATAAATATTTTAGTAAATAAAACTACTGCTTTTACTAAGATAGCAAATAACTCTACTGCTTTCAATGCTATGCTCACTATTTCAGAAAATAACGTTACTATTGCAAATAATACAACAGCAATGGGCATAATTGCAAATAACGCACAAGCTATGTCGACAGTTGCAAATAACGATACGTCTATAAGTGTTTTTGTAAATAATACAACAGCAATGGGCATAATTGCAAATAGCTCAACGGCTATGACCAAAATAACACTTACAGGACTTGCACTTAACAGAATGGTTAAAAGTAATACAGCTAAAAGCATATTAATTAGCAAAAATTCAACTTTACAAACTTACAAAAATAATATACAGAACACAATACAAGGAAGTACTGCTTATTTTAGAACTATCACAGGCTTTGCGGATGCTGATAATAACCCACCGCAAACTATTAATAGTACTTATGTAGGCATAACTTATTGTTATGGATATAAAGGTAATAGTTATTATGGAATTGTGTATCATGGCTACAATACAAGTATAGAAGCAGGCAGAGGAAATGGCTATAAAGATGAAACCAAAAAGTTTATAACATTAGGCGGGGCTAGATATGACCAAAGCGGAGACGGTTATTTTACTTACGCAATGTATCAAGCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b512599f80c389eb250579abc8a6e40be9382934afda003c70647f0a1c4d3b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50