Protein

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Genbank accession
QNI21191.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSILLTVNPASLPVTAGQAYSANDIRTLAVDATADDTMTNWKFPDCNSKAHSRLSMKSTPTSTLWFHARVKRTVSSFEIGVEFYGQPSGYSSTYKDYWGLQVTPWFMMHTRNQTQQNNQSFSGTFPAEGSDWFDFDLEMGSGKVYINGSLEHDYSGSYILGTDSSAFQFRIQGGEITEMVVANEDTRNWRVASEVPASLVSSTFSGDVVNIQTPGLTEDGLSSGGAGAEFVAKMPVVPGGYKVAGHTINTIAETNGTPESPMLAYILDGNLLGLHSTDSDGENVPNSFVHETKPSDGSNWSTADLSEREITVINPVEHYFNTAQITSGVYGTGGAAQFVKGGEWDGGGAIELQHAYSARNLWIFCDADTNRKWGTSDKIHVYYTRRDVAGQPTVNRVLTWDDTTGGYKSGLSSDDFDVISASGMQMKMYILPL
Physico‐chemical
properties
protein length:433 AA
molecular weight: 47122,46110 Da
isoelectric point:4,74994
aromaticity:0,10624
hydropathy:-0,35381

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNI21191.1
1 433
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,0009
Central domain 195 393 200 0,2101
C-terminal 394 433 39 0,9348
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-393
C-terminal
394-433

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_pir03
[NCBI] 		2762667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNI21191.1 [NCBI]
Genbank nucleotide accession
MT811961 [NCBI]
CDS location
range 215869 -> 217170
strand -
CDS
ATGTCAATTCTTTTAACAGTTAACCCTGCTTCACTGCCGGTTACTGCTGGTCAAGCTTATTCAGCCAATGACATTCGTACACTTGCGGTAGATGCTACGGCCGACGACACAATGACAAACTGGAAGTTTCCAGATTGTAACTCTAAGGCACATAGTCGCTTATCAATGAAATCCACTCCAACGAGTACGTTGTGGTTCCATGCGCGCGTCAAGCGCACAGTTAGTTCTTTTGAGATAGGCGTTGAGTTTTATGGCCAGCCAAGCGGCTATTCCTCTACCTATAAAGACTACTGGGGGCTACAGGTTACCCCATGGTTTATGATGCATACGCGAAACCAGACACAGCAGAATAACCAGAGCTTTAGTGGTACATTCCCTGCCGAGGGTTCTGACTGGTTTGATTTTGATTTAGAAATGGGTTCTGGCAAGGTTTACATCAACGGTAGCTTGGAGCATGATTACTCTGGAAGTTACATACTGGGTACTGACTCCAGTGCTTTCCAATTCCGAATCCAAGGTGGCGAGATAACAGAAATGGTTGTCGCCAACGAAGATACTCGAAACTGGCGTGTCGCTTCAGAAGTACCAGCCTCGCTTGTTTCTAGTACGTTTAGTGGCGATGTAGTCAACATTCAAACGCCTGGTCTGACCGAAGATGGTTTGAGTTCTGGCGGTGCCGGTGCAGAGTTTGTGGCCAAGATGCCTGTTGTCCCTGGTGGTTACAAAGTAGCTGGTCATACAATCAATACCATCGCCGAAACAAATGGTACTCCAGAATCACCAATGCTTGCTTATATCTTAGACGGCAACCTGCTAGGTTTGCATAGTACAGACAGTGATGGTGAAAATGTCCCTAACTCGTTTGTGCATGAGACCAAACCATCGGATGGTTCCAACTGGTCGACTGCTGATTTATCAGAACGAGAGATCACAGTAATCAACCCAGTTGAACACTACTTCAACACTGCGCAGATTACAAGTGGTGTCTATGGTACTGGTGGTGCGGCTCAATTTGTCAAAGGCGGCGAATGGGATGGCGGTGGTGCTATTGAACTACAGCATGCTTATAGTGCACGTAACCTGTGGATCTTCTGTGATGCCGACACCAATCGTAAGTGGGGCACATCGGACAAGATTCATGTTTATTACACTCGCCGAGATGTAGCAGGACAACCTACCGTTAACCGCGTCCTAACATGGGATGATACTACGGGTGGCTACAAGTCTGGACTGAGCAGTGATGACTTTGATGTAATATCTGCTTCCGGTATGCAGATGAAAATGTACATCCTGCCACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe060abc9a32d7be48a72ae05581ece6e1e31a1ff15901da2919dd19245a3351
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4200
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological and genomic characterization of a novel jumbo bacteriophage, vB_pir03 with broad host lytic activity against Vibrio harveyi N Misol,G. Jr., Katharios,P. and Kokkari,K. 2020-12-15 — GenBank