Protein

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Genbank accession
YP_010090652.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MANLSANSTIGGMPIWHKGIFPLAPAGDSIYFKSFKIYSENDKPQAVDNDFVSKASGGRYLNLVGFDKGVTIKDKNGASFSLSGTVGPGPQVASLRLSGIFAVEIPGGNPFILFDPTTDVTKPRFTVMGDTLAKYVYDESGRVFSPGNTPTNVQVGLGNVTNDKQVGINITSLQTMAGVLAAPNLVSNNRASQANHVPQFSQVVVKGSIQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22799,47380 Da
isoelectric point:8,75302
aromaticity:0,09767
hydropathy:-0,09023

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PspYZU05
[NCBI] 		1983556 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010090652.1 [NCBI]
Genbank nucleotide accession
NC_055720 [NCBI]
CDS location
range 135116 -> 135763
strand +
CDS
ATGGCAAATTTAAGTGCAAATAGTACAATTGGAGGCATGCCCATTTGGCATAAAGGTATTTTTCCTTTAGCGCCTGCAGGCGATTCAATTTACTTTAAAAGTTTTAAGATTTATTCAGAAAATGACAAGCCACAAGCAGTAGATAACGATTTCGTTTCTAAAGCTTCAGGTGGACGATATTTGAATCTTGTTGGATTCGATAAAGGTGTCACAATAAAAGATAAAAATGGGGCTTCTTTTAGTTTATCTGGGACTGTAGGTCCAGGCCCACAAGTCGCATCATTACGATTGTCTGGTATTTTTGCAGTAGAAATTCCAGGTGGAAATCCATTCATTTTATTTGACCCAACAACTGATGTCACTAAACCTCGCTTCACTGTAATGGGTGATACATTAGCTAAATATGTTTATGATGAGTCTGGCAGAGTGTTCAGTCCAGGCAATACTCCAACAAACGTACAGGTTGGCCTAGGAAACGTTACGAACGATAAACAAGTTGGAATCAATATTACATCACTGCAAACTATGGCTGGGGTCCTAGCGGCGCCTAACTTAGTGAGTAACAATCGGGCTTCACAGGCGAATCATGTGCCTCAATTTTCTCAAGTTGTGGTTAAAGGCTCAATTCAAGATTTTGGTTATTATTAA

Tertiary structure

PDB ID
9379e3b89db5325ed5de28ddf54be44644232ea779407217bb8b0ffe74eb2b2e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2873
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Pseudomonas strains for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2022 — GenBank