Protein

View in Explore
Genbank accession
QIN95111.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADYLSINEFPGNGAIMQIEVQFAGNNPDVGSGAVPYFKPEDVKAQFFTPATDTAPQIVEDKPLGYVGPNTFITLEPVPTGKILRVYRETEDRFSLVNFVALQNVTERDLDALARQTVFLVEEAKDAAQFAIDTAREAIQYATASTSVAREALEASARAEAKADAAVGTANGASGVANQALVNANKAQTAAEAAEQHATNVETLASQAQTAASAAETKATRAETKADQAIGTANAIDGKATQAINTANQATATANSAKSTAEAIEGKANQAIATANSATQVADDAKATAEAIDGKATTALANANTAIGTANQANVTAADAKDLATQANSNVAGKVNRTGDTLTGQLVGPSFQTLGAGGAASGPRFEMHWPGQSAGMWYLNNSGQITLAQTGGQGIAAQDYLSINMSDGYMLHRKNGRFMGTLAADGGMWTNTWNPASGGTLNAAASLQVANGVTDLSGVFRTRAPTAAANAHIFFENPNGTERVLMFADNAHNLNIRTSAGPVCFTVKNADKGIMVTGPSNFANTLYVTGRIQGGQDSLVQSRVYADGGGSWLGDSGNVYGGVWGGYLSNWIPANVVTLAAFRARSAEYFSANQIGSYCFLQNVSGTNIGQNGLLDAGNLRLSSHNNVQQVAPEGTWRCLGWCNNGGMSVWIRVY
Physico‐chemical
properties
protein length:655 AA
molecular weight: 68096,47320 Da
isoelectric point:5,07677
aromaticity:0,07176
hydropathy:-0,19817

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN95111.1
1 655
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9876
Central domain 244 442 200 0,2097
C-terminal 443 655 212 0,9280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-655

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BIM BV-45
[NCBI] 		2713154 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95111.1 [NCBI]
Genbank nucleotide accession
MT094430 [NCBI]
CDS location
range 34330 -> 36297
strand +
CDS
ATGGCAGACTACTTGTCTATCAACGAGTTCCCCGGCAATGGCGCCATCATGCAGATCGAGGTTCAGTTCGCTGGTAACAACCCCGACGTAGGTTCTGGTGCTGTGCCGTACTTCAAACCGGAAGACGTGAAGGCTCAATTCTTCACTCCGGCCACCGACACCGCTCCGCAGATCGTGGAGGACAAGCCTCTCGGCTATGTCGGCCCTAACACTTTCATCACGCTGGAGCCTGTGCCTACTGGCAAGATCCTGCGTGTGTATCGCGAAACCGAGGATCGTTTCTCGCTGGTCAACTTCGTTGCCTTGCAGAACGTAACCGAGCGCGACCTTGACGCGCTGGCTCGCCAGACAGTCTTCCTCGTCGAAGAAGCCAAGGACGCCGCGCAGTTCGCAATCGACACTGCTCGCGAAGCTATCCAGTACGCTACCGCATCCACCTCGGTGGCCCGGGAAGCGCTGGAGGCGTCGGCCCGTGCTGAGGCGAAAGCCGACGCCGCTGTAGGCACTGCGAACGGCGCGTCCGGTGTAGCCAACCAAGCTCTGGTCAATGCCAACAAAGCCCAAACGGCTGCGGAGGCGGCAGAGCAGCATGCCACCAACGTGGAAACGCTGGCCTCTCAGGCTCAGACTGCGGCTTCGGCTGCTGAAACCAAGGCCACTCGCGCAGAGACTAAAGCCGACCAAGCTATCGGGACTGCTAACGCGATTGACGGTAAAGCGACTCAGGCAATCAACACCGCCAACCAAGCTACGGCCACTGCGAACTCCGCGAAGTCCACTGCTGAGGCTATTGAAGGCAAAGCGAATCAGGCGATTGCCACCGCCAACAGCGCCACACAAGTGGCCGACGACGCTAAGGCTACGGCTGAGGCTATTGACGGTAAAGCCACCACTGCTCTGGCTAACGCCAACACAGCTATCGGTACTGCGAACCAAGCAAACGTCACCGCAGCCGACGCTAAGGATCTTGCCACTCAGGCAAACTCCAACGTGGCAGGCAAGGTGAACCGGACAGGTGACACCTTAACAGGTCAGCTAGTCGGCCCGTCGTTCCAAACATTGGGAGCGGGAGGTGCTGCCTCTGGGCCGCGTTTCGAAATGCACTGGCCGGGGCAGTCGGCGGGTATGTGGTACTTGAACAACAGCGGCCAGATTACTCTGGCGCAGACTGGTGGGCAAGGCATCGCGGCACAAGACTACTTGTCTATCAACATGTCTGACGGTTATATGCTGCACCGTAAGAACGGACGTTTCATGGGAACGTTAGCTGCGGACGGCGGCATGTGGACTAACACATGGAACCCGGCGTCGGGCGGCACGCTTAACGCGGCTGCCTCCCTACAGGTAGCCAACGGTGTAACCGACCTCTCGGGGGTATTCCGCACCCGCGCCCCAACTGCTGCGGCTAACGCGCACATCTTCTTCGAGAACCCGAACGGCACCGAGCGCGTACTCATGTTCGCAGACAACGCCCATAACCTGAACATCCGTACCAGCGCCGGGCCGGTTTGCTTTACGGTGAAGAACGCCGACAAAGGTATCATGGTAACTGGGCCGTCGAACTTCGCCAACACTCTGTACGTTACAGGGCGTATCCAAGGCGGACAGGACTCGCTTGTGCAGTCTCGGGTGTACGCCGACGGCGGCGGTAGCTGGCTCGGCGACAGCGGTAACGTGTACGGCGGTGTGTGGGGCGGCTACCTGTCCAACTGGATCCCGGCGAACGTTGTCACCCTCGCCGCATTCCGCGCACGCTCGGCGGAATACTTCTCGGCCAATCAGATCGGCTCGTACTGCTTCTTGCAGAACGTGTCTGGTACTAACATCGGCCAGAACGGCCTGTTGGACGCGGGGAACCTGCGGCTGTCGTCCCATAACAACGTGCAGCAAGTAGCCCCGGAAGGGACGTGGCGCTGCCTCGGCTGGTGCAACAACGGCGGCATGTCCGTATGGATTCGAGTTTACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ce08c72cceb09fdd4bc3e12cafcad1e3598f320141f390cb9479c05f2103639f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biopesticide 'Multiphage' based on phages of phytopathogenic bacteria Pseudomonas syringae and Pseudomonas fluorescens used in agriculture to control plant diseases Pilipchuk,T.A., Gerasimovich,A.D., Ananyeva,I.N., Kolomiets,E.I., Popov,F.A. and Novik,G.I. 2015 — GenBank