Protein

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Genbank accession
AFO72090.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTFKELVNKVRNLVLEAKNVTIEDTENNFTSDNVEGALKEVFQNGVNAKSNVVTALNSKGADVTTSDTWEEIKNKIDIKEGRLDLRETTLSNNYSYLVTNGAIKYIERCSGNFKTFEYEEPYFYVIKETHLIKINAIDETVVFDITLANANFSCICVTQEYLFISDNTKLYKINKITGIEVQSIEGAYYKLCTYGEFIYGVYGDETSSTLHKIRISDMYIMLTKNLVSNGIYNFKGGKFVCNKNAIYATTEHSNSSSITTCHLSKINFDFAIAKDFRIGGYLHMKNIKFLNDFVIVSDAERGIEIDSNKKVL
Physico‐chemical
properties
protein length:312 AA
molecular weight: 35394,74410 Da
isoelectric point:5,67818
aromaticity:0,11218
hydropathy:-0,22340

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFO72090.1
1 312
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,9774
Central domain 87 301 216 0,3428
C-terminal 302 312 10 0,5364
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-301
C-terminal
302-312

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiMMP02
[NCBI] 		1204534 Uroviricota > Caudoviricetes > Colneyvirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFO72090.1 [NCBI]
Genbank nucleotide accession
JX145341 [NCBI]
CDS location
range 24891 -> 25829
strand +
CDS
ATGACTTTTAAAGAGTTAGTTAATAAAGTTAGAAATCTTGTATTAGAAGCAAAGAATGTAACTATAGAAGATACAGAAAATAACTTTACAAGTGATAATGTAGAAGGAGCATTGAAAGAGGTTTTTCAAAATGGAGTTAATGCTAAAAGTAATGTAGTAACAGCATTAAACTCCAAAGGTGCAGATGTTACTACAAGCGATACATGGGAAGAAATAAAGAATAAAATTGATATAAAAGAGGGGAGATTAGATTTAAGAGAAACAACACTTTCAAATAACTATTCGTATTTAGTTACAAATGGAGCTATAAAATATATTGAAAGATGTAGTGGGAACTTCAAAACTTTTGAATATGAAGAACCATATTTTTATGTAATTAAAGAAACTCATCTAATTAAAATTAATGCTATTGATGAAACAGTAGTTTTTGACATTACTTTAGCTAATGCTAACTTCTCATGTATCTGTGTTACTCAAGAGTATTTATTTATATCTGACAATACTAAATTATATAAAATAAACAAGATAACAGGAATTGAAGTGCAGTCAATAGAAGGTGCTTATTATAAGTTATGTACTTATGGGGAATTTATTTATGGAGTATATGGAGATGAGACTTCTTCTACACTTCATAAAATTAGAATATCTGATATGTATATAATGCTAACTAAAAATTTAGTTTCTAATGGTATTTACAATTTTAAAGGAGGTAAGTTTGTTTGCAATAAGAATGCTATTTATGCTACAACAGAACACTCAAATTCAAGTAGTATTACAACATGTCATTTATCTAAAATAAATTTTGATTTTGCCATTGCTAAAGATTTTAGAATTGGAGGATATTTGCATATGAAAAACATTAAGTTTTTAAATGATTTTGTTATTGTATCTGATGCAGAAAGAGGTATAGAAATTGATAGCAACAAAAAAGTGCTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b11a50d36ed8295e3016bdb934b2e754846627b012e1f9ed242272a238515a7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7823
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Evidence of In Vivo Prophage Induction during Clostridium difficile Infection Meessen-Pinard,M., Sekulovic,O. and Fortier,L.C. 2012 22923402 GenBank