Protein

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Genbank accession
QDB71221.1 [GenBank]
Protein name
neck protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANSSLGNRISELPRSTRSINDADLTPISQIKTNNPETVAATVGDIRATLDFDNAYNSIPEGLAGTFPEERFYVYTDNSKRFVNGYINKNGVSEVILDKSGQPRRWATPLYMLAIGEQSITVASVDQMRIMAPQVDGQVVRMRNFRQGNVQYKNGGDWVYDANDKTTKDDGVMCVVTNTGERFKRDISSGSIETDWFFDPVMDIADYSLTLNKAAEWVEVKGTEWWQTWLPSTPAYITMVGPGGVRTCKKPVWLRMWAVSWDFRGTLLDFTGGAVGQTNVSVVYGHRNSTLSNLRMLSSVALKQKGINVSTTSGNIHGLSAAFLNFNNISINRHDIAWDLGDNCYLNNWFQCTTQGCRLPINAPKSANAGETLVWTKCIFGDGIGPYLNTGMSMTFHGCSFDYSGYKTEADQLANAEKEGLFNIDNCTVIMYGCGNEYGNLNSRWTGPVWRGSGIIKLYECQWILTQSSTVEPKETTPHLVHNYYFEDTSADLSSKVYLEGFYVPNPDLNRFSGSWTNGCFIKVTESYPGRYKDMWRNYTLGKGANMLISPNPNNVGYLTINRSRCVGGTVISPTETSLFKVSTNGNKLVITSSDTTKAPKTLSFYTHGKAGNWYGSRLTVTGNRAMPDVRVGTNCFGVVGYVAQDNSITSLGEQRQTWTNSLQGITTTAQSTPGMRMTQLGTTEYLPLCPPGTEWVRVSIEMTNFGISAGEEPAVLEITDFYACEVGICRDTNHRVW
Physico‐chemical
properties
protein length:738 AA
molecular weight: 81857,06430 Da
isoelectric point:6,14886
aromaticity:0,10569
hydropathy:-0,34743

Domains

Domains [InterPro]
DC_1083
STR
10–738
DC_1083
IPR059934
RBD
121–187
IPR059934
QDB71221.1
1 738
Architecture
STR
STR 10-738
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB71221.1
1 738
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9843
Central domain 207 534 329 0,9810
C-terminal 535 738 203 0,9858
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-534
C-terminal
535-738

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Moabite
[NCBI] 		2587814 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus moabite >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB71221.1 [NCBI]
Genbank nucleotide accession
MK994515 [NCBI]
CDS location
range 173172 -> 175388
strand +
CDS
ATGGCTAACTCAAGCTTAGGCAATCGTATTTCGGAACTCCCACGTTCTACGAGATCGATCAACGATGCCGACTTAACCCCGATTTCTCAAATCAAAACCAACAATCCGGAAACCGTAGCGGCAACCGTCGGTGACATTCGTGCCACCTTGGATTTTGATAATGCTTATAATTCCATCCCAGAAGGCCTGGCAGGGACTTTCCCTGAAGAGCGCTTCTATGTTTACACCGATAACTCAAAACGCTTTGTAAACGGCTACATCAACAAAAACGGCGTATCTGAAGTTATCCTCGACAAATCAGGTCAACCTCGTCGCTGGGCTACCCCGCTCTATATGCTCGCTATCGGTGAGCAATCTATCACAGTAGCTTCTGTTGACCAGATGCGTATCATGGCTCCGCAAGTTGACGGCCAAGTCGTACGTATGCGTAACTTCCGCCAGGGTAACGTTCAGTACAAAAACGGTGGCGATTGGGTTTACGACGCTAACGACAAAACCACCAAAGACGACGGCGTGATGTGTGTTGTTACCAACACCGGCGAACGTTTCAAGCGTGACATCTCTAGCGGCTCTATCGAAACCGATTGGTTCTTCGACCCGGTAATGGATATCGCAGACTATAGTCTGACGCTGAACAAAGCCGCTGAGTGGGTGGAAGTAAAAGGTACTGAGTGGTGGCAGACCTGGTTACCAAGCACCCCAGCTTACATTACCATGGTAGGTCCTGGCGGTGTTCGTACCTGTAAGAAACCAGTATGGCTCCGTATGTGGGCCGTGAGCTGGGACTTCCGTGGTACTTTGCTGGACTTCACTGGAGGTGCTGTCGGTCAGACCAACGTCTCCGTAGTCTACGGTCACCGTAACTCTACACTGAGCAATCTGCGCATGTTATCCAGCGTAGCGTTGAAGCAGAAGGGTATCAACGTCTCAACGACTTCCGGTAACATTCACGGTCTGTCCGCAGCGTTCCTGAACTTCAACAACATCTCAATCAACCGTCACGACATTGCTTGGGATCTGGGCGATAACTGCTACCTGAACAACTGGTTCCAGTGCACCACCCAAGGTTGTCGTCTGCCAATCAACGCGCCTAAGTCCGCAAACGCCGGTGAAACTCTGGTATGGACTAAGTGTATCTTCGGTGACGGTATTGGTCCTTACCTGAACACAGGTATGTCGATGACCTTCCACGGTTGTTCCTTTGACTACTCCGGTTACAAAACCGAAGCTGATCAATTGGCTAACGCCGAGAAAGAAGGTTTGTTCAATATCGATAACTGTACTGTCATCATGTATGGTTGCGGTAACGAATACGGTAACTTGAACAGTCGCTGGACTGGGCCGGTGTGGAGAGGTTCTGGTATTATCAAGCTTTACGAGTGCCAGTGGATTCTGACTCAATCGAGCACTGTTGAGCCAAAAGAAACTACCCCGCACTTGGTCCACAACTACTACTTCGAAGATACCTCTGCCGACTTGTCGTCTAAGGTCTATCTGGAAGGGTTCTACGTCCCTAACCCGGACCTGAACCGTTTCTCTGGTAGTTGGACTAATGGCTGCTTCATCAAAGTCACTGAGTCTTACCCAGGCCGTTATAAGGACATGTGGCGTAACTACACGTTGGGTAAGGGGGCTAACATGTTAATCTCCCCTAATCCTAACAACGTTGGTTATTTGACTATCAACCGTTCTCGTTGCGTTGGCGGCACTGTAATTTCTCCTACTGAGACTTCACTGTTCAAAGTGTCTACTAACGGCAACAAGTTAGTAATCACCAGTTCGGATACTACCAAAGCACCTAAAACCTTAAGTTTCTACACTCATGGTAAAGCGGGTAACTGGTACGGCTCTCGATTAACGGTTACTGGTAATCGGGCAATGCCAGATGTACGTGTCGGTACGAACTGCTTCGGCGTAGTAGGTTACGTAGCTCAGGATAACAGCATCACTTCGTTGGGCGAGCAACGCCAGACCTGGACTAACTCGCTGCAGGGTATTACAACCACAGCACAATCTACTCCGGGTATGCGCATGACTCAGTTAGGCACTACTGAATATCTGCCGCTTTGTCCTCCAGGTACCGAATGGGTTCGTGTCTCTATTGAGATGACTAACTTTGGCATCTCAGCAGGAGAAGAACCTGCGGTATTGGAAATCACCGACTTCTACGCTTGTGAAGTAGGTATCTGTCGCGACACCAACCACCGCGTTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
27e853943863b0fda00c938485fc52b380059be29a3595e3af068f5c270e5f75
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50