Protein

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Genbank accession
YP_009834946.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAELVISSISNGGIKSNKLSENFSGLNQIKISPKTDTQNKIASINGYSINPVEIDGLECISINNDLSVGIRDVFNFKNSTDVNRFEGWINSIGSGIILMISHGENITTTSINNYFKKIGCIGWSNHWNPSTNTQNTRYAAIYDCGLKKIMVEQFGVSSLINVSLEVVFDTFNDIGVVGYGNNIISDQQEYINEKSKTAEFKTFMNKTLISDMVVNWGETLRFSLETYRDDLAAAAGESIRLYYIGYNGNTSVTSGYVSSLDTSGQWDFVYNDFVVPTTIDRLTVYATSWPVKSQYIGTTGVRTVSVFRKKPVVVS
Physico‐chemical
properties
protein length:315 AA
molecular weight: 34917,84150 Da
isoelectric point:5,33976
aromaticity:0,10794
hydropathy:-0,13651

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009834946.1
1 315
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,5239
Central domain 58 256 200 0,3481
C-terminal 257 315 58 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-256
C-terminal
257-315

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-sw
[NCBI] 		2026113 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009834946.1 [NCBI]
Genbank nucleotide accession
NC_048674 [NCBI]
CDS location
range 142538 -> 143485
strand +
CDS
ATGGCCGAACTTGTTATATCAAGTATTTCAAATGGTGGTATCAAGTCTAATAAATTATCAGAGAACTTTTCTGGATTAAATCAGATCAAGATATCCCCAAAAACAGACACTCAAAATAAAATTGCGTCTATCAACGGATACTCAATTAACCCAGTAGAAATAGACGGTCTTGAGTGTATCAGTATAAACAACGATCTCAGTGTTGGAATCAGAGACGTTTTTAATTTTAAGAATTCAACTGACGTAAATCGGTTTGAAGGTTGGATCAATTCCATTGGTAGTGGGATTATTCTAATGATCTCTCATGGTGAAAACATAACAACTACATCAATCAACAACTATTTCAAAAAAATTGGATGTATTGGTTGGTCAAATCATTGGAATCCATCAACAAACACACAGAACACCCGATACGCTGCAATATATGACTGTGGTCTGAAAAAGATTATGGTGGAACAATTTGGGGTTAGTTCGCTTATAAATGTTTCTCTAGAAGTTGTTTTTGATACGTTCAATGATATTGGTGTTGTAGGATATGGAAACAATATCATCTCAGACCAACAGGAATATATAAACGAAAAATCAAAAACAGCGGAATTCAAAACATTCATGAATAAAACCCTTATATCTGATATGGTGGTTAACTGGGGCGAAACCCTTAGATTCAGCCTTGAGACGTATAGGGACGACCTAGCGGCGGCGGCTGGTGAATCAATAAGACTATATTATATTGGATATAACGGAAATACTTCCGTKACTTCCGGATATGTYAGTTCTCTTGATACGTCTGGKCAGTGGGATTTTGTTTATAAYGATTTTGTTGTTCCWACCACAATAGATAGRTTAACMGTATATGCKACGTCATGGCCCGTTAAATCCCAATATATTGGTACTACTGGGGTTCGCACGGTATCCGTATTCAGGAAAAAACCGGTAGTTGTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa8ee4cde4a14ed5cf7d264814b9948c66dad91c8e091a988d8bf8449935f16a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro design and evaluation of phage cocktails against multidrug-resistant Aeromonas salmonicida Chen,L., Yuan,S. and Ma,Y. 2018-07-06 — GenBank