Protein

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Genbank accession
AOO06753.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MGKLNVGNLEGNFPNYRVTLHHDSELGIGSQLIIQNQQYMPLPSNTQNYHDNATYGARGAVRGAVRWNTTTEDIEVYNGSVWIPKTPPAAGIGTESNPARSGVEIFNAGLASGNYWIQPDNQVAYEMYVDNDRNGGGWTLCVVARTSTCQDHMNNSAVRITTTSGPRTSNTSTTKMADSWIQALRNSSTYTGSTAYWMEALNFNKSVFISSAATVNLLDSASNDNERTRISTTYQGTLDNRNPNTGTRGFGDHHTSGGTYFAYGRHPEEGNNCGFREDTNGSSDGYLWVK
Physico‐chemical
properties
protein length:290 AA
molecular weight: 31753,18290 Da
isoelectric point:5,78527
aromaticity:0,09655
hydropathy:-0,68793

Domains

Domains [InterPro]
DC_0522
ATT
1–124
DC_0522 DC_0434
IPR036056
STR
94–140
IPR036056
NF040941
Unmapped
108–140
NF040941
AOO06753.1
1 290
Architecture
ATT
STR
STR
ATT 1-124 | STR 125-140 | STR 145-290
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO06753.1
1 290
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,0156
Central domain 162 279 119 0,1096
C-terminal 280 290 10 0,9782
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-279
C-terminal
280-290

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO06753.1 [NCBI]
Genbank nucleotide accession
KX349269 [NCBI]
CDS location
range 27003 -> 27875
strand +
CDS
ATGGGAAAGTTAAACGTCGGTAACTTAGAGGGTAACTTTCCTAACTACCGAGTTACTCTTCACCATGACAGTGAGTTAGGTATTGGAAGTCAACTGATTATTCAGAATCAGCAGTACATGCCTCTGCCTTCTAATACTCAAAATTATCATGACAATGCAACTTACGGTGCTAGAGGTGCAGTAAGAGGTGCAGTAAGGTGGAATACTACCACCGAAGATATTGAAGTATATAATGGTAGTGTGTGGATTCCTAAGACACCTCCTGCTGCAGGGATTGGCACTGAGAGTAATCCTGCTAGAAGTGGTGTAGAGATCTTTAATGCTGGTTTAGCATCTGGTAACTATTGGATTCAACCTGATAATCAAGTAGCATACGAAATGTATGTTGATAATGATAGAAATGGTGGTGGATGGACATTGTGTGTTGTTGCTAGAACATCAACATGTCAAGATCACATGAACAATAGTGCTGTTCGTATTACTACAACTTCTGGACCCAGAACTTCTAACACTTCTACTACCAAGATGGCAGACTCTTGGATTCAAGCACTGCGTAACTCCTCTACATATACTGGAAGCACCGCATATTGGATGGAAGCACTTAACTTTAACAAGAGTGTCTTTATCTCTAGTGCTGCAACTGTCAACTTGCTTGATAGTGCATCAAATGATAATGAGAGAACTAGAATCTCGACTACCTATCAAGGTACTTTAGACAATAGAAATCCTAACACTGGAACCAGAGGTTTCGGTGACCACCATACATCAGGCGGCACATACTTCGCGTATGGTAGACACCCTGAAGAAGGTAATAACTGCGGATTTAGAGAAGATACAAACGGTTCTTCTGATGGTTACTTATGGGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3808f4519d083b92019e610347055d7be5959b9d8bc2c2356eba178de1ccc9c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50