Protein

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Genbank accession
YP_009805740.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGNTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTFNPAGSIVQGEVISYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEINASATIAFYYTKRFAGDMFYNIEPETDIPLTIQNGHISIDFPSARITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34379,14490 Da
isoelectric point:4,95900
aromaticity:0,14047
hydropathy:-0,28696

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
YP_009805740.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009805740.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,8985
Central domain 13 211 200 0,0209
C-terminal 212 299 87 0,5004
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S133
[NCBI] 		2231356 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus S133
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009805740.1 [NCBI]
Genbank nucleotide accession
NC_048011 [NCBI]
CDS location
range 9346 -> 10245
strand +
CDS
ATGTACTACTCTCTAATGAGGGAGTCAAAAGTTATAGTTGAGTATGATGGCAGGGCTTATCATTTTGATGCCCTGTCAAATTACGATATCAATACGTCCTATGAGGAATTTAAAACTCTTCGTAGGACTATCCATCGTAGAACCAACTATGCTGACTCTATTATTAATGCACAAACTCCATCTTCAATATCACTGGCTATAAATTTTAGTAATACCCTTACTGAAGCTAACTTCTTTGAATGGATGGGCTTTGACCGAGAGGGTAATACATTCTTACTACCACTTTATAGTACAAATATTGAGCCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAACTGCTATGTATCTACCGTAGACTTTTCTCTAGACAAAAGCGTTCCTATCCTAAACGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTGTCTACTTTTAATCCTGCTGGTTCTATTGTTCAGGGTGAAGTTATATCATATAGTCCTCCTAGAGTATCCACCAATAGTAATGTTTTACCAGCTCTTTTATCCGCTTCTATGTCATTCCAGCAACAATGTTCTTGGAGGGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATTAATGCTTCGGCAACAATTGCATTTTACTACACTAAGCGATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCAGAATGGACATATTTCGATTGACTTCCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATATATACAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a8fb7d1afffb3de53b83417b9ba93f597af030b30546852677df3b1c8a28f41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50