Protein

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UniProt accession
A0A140XAU5 [UniProt]
Protein name
Right handed beta helix region family protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPVFPLGLETSEQSTLAGFTNTGTIEHGPDAVMTLPESNTVAGLPSAVRFNSEADEFEGYYENGGWLPLGGGGIRWEVLPHASTAVLDKGRGYLVDNSTDVSTVVFPTPTRVGDSITVCDLYGKFSIYPLTIDPNGHPMYGSTEPMTLSTDSVSATFTWSGDARGWIVTAGVGLGLGRVYSRTIFTETVSADTAQVTLTTQPSIVDVYVDGKRLLESKYSLNGFNVDFSPSIPSGSELQVIQYVPIQLGVGGGGSGGGTVITWIYNSGSAVGGETEIELDVDAEDVSEIYISGSRQQKGLGFNYDSVTKIITLADELEAGDEVVVVVNGDPTLYNQIDRTPNEVARSANVPVSQVILTSDTITKLDGKTVIYDVNAQKMWSLPSGIPTGASIVSVIGSNLTYAPGNVVVPLLPAPGSKDALEAYKSELLAGNTGLVAASAVVVTPQGTLAEMQYYVTPEQFSHLVTAGEYVDENTDFTLAVQGAVDYAASHPGVIVRGTEKVYGVSRILVAVGVKVIDGLKLKCIVANTDTLLYSFVDTGHTDLQIRNCILNGNNNTRKGIIVSGVIRATIEKNYVYGLDGTGEAYGIRIGTTSTTSMNINNKISDNIIEMPTDPFGGTGNYAICGIGMIGQITSLYGGLDTNAGVPLFPSTITLRDTIIEGNFISGGTHGVQGLGLFRTLITKNHIMGNTHRNINLSPNCQRVNIVGNLLIDGGSSGVNVAWGCRWINISGNHIQTSTASVSPSDDAAIQLYKGVDQCTVSGNTILGDWKYSVYMGAGVTNVSVNANGLFAGSLASIAVESDWVLTADYPLAIYSSSRNPNTTPIAGDTGNINIGGNAYGAGSCAIYLAATNSKAMYNVNIHDEVINSVTSRPHVVYAYDAGTLMTDGSLTNIAARGATASKYYLSRGRGAFSVIRDITALDDPKGEVTVLGGTPSAVFGPNLYIASGTITDFTGAQAGDIINLRMGDGVVLIHNSTVMRLKGGVNATASGGLAIMTFQRRAGIWFEMSRNF
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 107162,09790 Da
isoelectric point:4,77200
aromaticity:0,07556
hydropathy:0,05201

Domains

Domains [InterPro]
DC_1064
ATT
4–217
DC_1064 G3DSA:3.30.2020.50 DC_1445 IPR039448 DC_1714
G3DSA:3.30.2020.50
ATT
339–421
G3DSA:3.30.2020.50 IPR012334 IPR006626
IPR011050
STR
499–783
IPR011050
IPR006626
Unmapped
547–571
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
A0A140XAU5
1 1019
Architecture
ATT
ATT
STR
RBD
ATT 4-217 | ATT 335-421 | STR 422-888 | RBD 889-1019
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A140XAU5
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 478 478 0,9951
Central domain 479 930 453 0,9931
C-terminal 931 1019 88 0,9810
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-478
Central
479-930
C-terminal
931-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage phiDP10.3
[NCBI] 		1542132 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae >
Host Dickeya sp.
[NCBI] 		1914291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
825240826375217115c068670ce52aae8f7d2046af67ec8540aeedd57914c2de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50