Protein

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Genbank accession
YP_009842138.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MTITNKDYDTWESKMYGLPYAVYSYYIDSTVAGENTAVIGASGDNVFSVVYTPFLDIADLELEEIPYDNKRFGNISEIRPEIKANPHVFRIKKLLKGSKFVGEFETYKVKKSIGGKRNWRNESKLYNYPYTYLMLSDGINDPMILKPQFCSIPSCSVGIKLSVSDRCSYGIFVQTYKGDTDGMTEALVSNDALELPCTSSAYANWVATSKNQTAQSIQNTVNQTILNDKIAKNKMNLGIANSVVGGVASAFTGNVGGVLDSVFGGIGSYMDKKHTNMQSQLTRESAISSALATANDMRSTPNTLLSQGSNIIYGLRNGGQELRLYRYGLTERYYEKIGDYFAQFGYKQNKMMKININSRYYYNYIKTIGINIKTNKIPNNYLNILKGIFDNGTTIWHIDNEGVEIGNYSMDNREV
Physico‐chemical
properties
protein length:415 AA
molecular weight: 46499,06030 Da
isoelectric point:8,53892
aromaticity:0,11325
hydropathy:-0,38145

Domains

Domains [InterPro]
IPR048710
120–412
IPR048710
YP_009842138.1
1 415
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CPD2
[NCBI] 		2420237 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009842138.1 [NCBI]
Genbank nucleotide accession
NC_048738 [NCBI]
CDS location
range 9660 -> 10907
strand +
CDS
ATGACAATAACTAATAAAGATTATGATACGTGGGAATCTAAAATGTATGGTTTACCATATGCTGTATATAGTTATTATATTGACTCTACCGTGGCGGGTGAAAATACAGCTGTTATAGGTGCAAGTGGTGACAATGTTTTTAGTGTTGTTTACACCCCTTTTCTAGATATTGCTGATTTAGAACTAGAAGAAATTCCATATGACAATAAAAGATTTGGTAATATTTCAGAAATTAGACCCGAAATAAAAGCAAATCCGCACGTTTTCAGAATCAAAAAATTACTAAAAGGTTCTAAATTTGTAGGTGAGTTTGAAACATACAAAGTAAAAAAGAGTATTGGTGGTAAAAGAAATTGGAGAAATGAAAGTAAATTATATAATTATCCGTACACTTATTTAATGCTAAGTGATGGTATAAACGACCCTATGATTTTAAAGCCTCAATTTTGTTCAATTCCTAGTTGTTCAGTTGGTATAAAATTATCTGTTTCAGACAGATGTTCTTATGGTATATTTGTACAAACTTATAAGGGTGATACAGACGGAATGACAGAAGCTTTAGTATCAAATGATGCACTTGAGCTACCTTGCACAAGTTCAGCATATGCAAATTGGGTTGCAACTTCAAAAAATCAGACAGCACAATCAATTCAAAATACTGTAAACCAAACGATTTTAAATGATAAAATAGCTAAAAATAAAATGAATTTAGGTATCGCAAATAGTGTAGTAGGTGGTGTTGCTAGTGCGTTTACTGGTAATGTTGGCGGTGTATTAGATAGTGTGTTTGGTGGTATTGGTTCATACATGGATAAAAAACATACTAATATGCAAAGTCAATTGACTAGAGAATCAGCTATCAGTTCAGCTTTAGCAACAGCGAACGACATGAGGTCAACACCTAATACTTTACTTAGTCAAGGTTCTAATATAATTTATGGTTTACGTAATGGTGGACAAGAGTTAAGACTTTATAGGTATGGTTTAACAGAAAGATATTATGAAAAAATAGGGGATTATTTTGCACAGTTTGGATATAAACAAAATAAAATGATGAAAATTAATATTAATTCAAGATATTATTATAACTATATAAAAACAATAGGAATTAATATAAAAACTAATAAAATTCCTAATAATTACTTAAATATCCTTAAAGGTATTTTTGACAATGGTACTACAATATGGCATATTGATAATGAAGGTGTTGAAATTGGTAATTATTCTATGGATAATAGGGAGGTATAA

Tertiary structure

PDB ID
1222a9db22d9917d23906831fe61ba3fb526ec41a2adf64d8d59669ccfbfbc66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Clostridium perfringens phage CPD2 Shin,D. and Ryu,S. 2023-05-24 — GenBank