Protein

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Genbank accession
ADW95259.2 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSLTKPRCFRKASYLSQLGTLQNLANTGDDVLVIDVDYEFTNGETVDFKGQLVRIECEAKFIGDGALIFTNMASGSVVEKPFMESKSTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALMPQEVKDQYVVSTLDIRDCVGVEVRRAGGLMAAYLFRNCHHCKVIDSDTIIGGKDGIITFENLGGEWGIGNYAIGGRVHYGSGSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTSRNYNLQFRDSVALSPVWDGFDLGSDPGMAPEEDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGILAYAFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMVISAPNSTLSGIVGNVPPDRILAGNILDPVLGHTRINGFNSDSAELSFRIHKLTKTLDSGAIRSTLNGGPGTGSAWTEMTAISGSAPNAVSLKINRGDFKATEIPVAPTVLPDEAVRDHNSIALYFDQEALWALVKKPNGSLTRMKLA
Physico‐chemical
properties
protein length:550 AA
molecular weight: 59012,03940 Da
isoelectric point:5,37983
aromaticity:0,08000
hydropathy:-0,12964

Domains

Domains [InterPro]
IPR015331
3–550
IPR015331
ADW95259.2
1 550
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UAB_Phi78
[NCBI] 		979726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium
[NCBI] 		90371 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADW95259.2 [NCBI]
Genbank nucleotide accession
GU595417 [NCBI]
CDS location
range 40415 -> 42067
strand +
CDS
ATGTCATTAACTAAACCACGTTGCTTCAGGAAGGCAAGCTATCTAAGTCAGTTAGGCACTTTGCAGAATCTAGCTAACACTGGAGATGACGTACTTGTTATCGATGTTGACTACGAGTTCACTAACGGAGAGACTGTAGACTTCAAAGGTCAACTGGTTCGTATAGAGTGCGAAGCTAAGTTCATTGGTGATGGTGCTTTGATCTTCACTAATATGGCTAGTGGTTCTGTGGTAGAAAAGCCTTTCATGGAAAGCAAGTCCACACCTTGGGTTATTTACCCTTGGACAGAAGATGGAAAGTGGATTACAGATGCACAAGCTGTTGCTGCTACATTGAAACAATCTAAGACCGAAGGATATCAACCGGGAGTCAACGATTGGGTTAAGTTTCCCGGACTTGAAGCATTGATGCCTCAAGAGGTGAAAGATCAGTATGTAGTATCCACACTGGACATCCGTGACTGCGTAGGTGTTGAGGTAAGACGCGCTGGCGGCCTTATGGCAGCTTATTTGTTTCGCAACTGTCATCACTGTAAGGTGATTGATTCTGACACCATCATTGGTGGTAAAGACGGAATCATAACCTTTGAAAACTTAGGTGGTGAATGGGGAATCGGTAACTATGCCATAGGTGGTCGTGTACATTATGGCTCAGGAAGTGGTGTGCAGTTCCTTCGAAATAATGGAGGTGCATCTCACAACGGTGGAGTTATTGGTGTAACCTCATGGCGTGCAGGTGAGTCTGGGTTCAAGACATGGCAAGGTTCTGTAGGTGCAGGTACATCTCGTAACTATAACCTTCAGTTCCGTGACTCAGTTGCACTGTCTCCCGTGTGGGATGGCTTTGACTTAGGCTCAGATCCAGGAATGGCACCAGAAGAGGACAGACCGGGAGACTTGCCTGTGTCTCAATACCCTATGCATCAGCTACCTAACAACCACATGGTTGATAACATCCTTGTTATGAATTCATTAGGTGTGGGTTTAGGTATGGATGGTCGCGGTGGATATGTATCTAATGTTACCGTACAAGATTGTGCAGGTGCAGGTATCCTTGCTTATGCATTCAACCGTACCTTCTCTAACATTACGGTGATTGACTGCAACTACATGAACTTCGATTCAGACCAGATAATCATCATTGGTGACTGCATCGTGAATGGCATCCGCGCCGCTGGTATTAAACCTCAGCCATCTAAGGGTATGGTCATCAGTGCACCTAACTCGACCCTTAGTGGGATTGTAGGTAACGTGCCACCAGACCGTATCCTTGCAGGTAACATCCTTGACCCTGTGTTGGGTCATACAAGGATTAATGGGTTTAATAGTGACTCGGCAGAACTGAGCTTCAGAATCCACAAGCTTACCAAGACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAATGGTGGGCCGGGTACAGGTTCTGCATGGACGGAGATGACTGCAATTTCAGGGTCAGCTCCAAATGCTGTCTCGTTGAAGATTAACCGTGGAGACTTCAAGGCAACTGAGATCCCCGTGGCACCTACTGTGCTTCCAGATGAAGCGGTAAGAGACCACAACTCTATTGCGCTCTATTTCGATCAGGAGGCTCTTTGGGCTTTAGTTAAGAAACCAAACGGAAGTCTTACACGAATGAAGCTTGCTTAA

Tertiary structure

PDB ID
8285a5cceea8c57b57a1a7e75b567608c74c0e483439ffc2af01793081afc8ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6994
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New enterobacteriophages and their use to control Salmonella enterica Spricigo,D.A., Bardina,C., Cortes,M.P. and Llagostera,M. 2013-07 — GenBank