Protein

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Genbank accession
XOD32558.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNLVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSFSNNRLVAILTSGKVNFPPEVVSWLRAAGTSAFPSDSLLSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPKRTYEIVEQFMSAIGGTNNEIARLPTSSAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYDELDGYISSTHAEFTGQAESWELKEDYVVISENAVGFTIYAQRTAQAGQGGMRNLSFSGVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV
Physico‐chemical
properties
protein length:371 AA
molecular weight: 40265,56840 Da
isoelectric point:5,07188
aromaticity:0,11321
hydropathy:-0,09677

Domains

Domains [InterPro]
PS52031
22–192
PS52031
IPR039477
58–122
IPR039477
XOD32558.1
1 371
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage sb4
[NCBI] 		3387549 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD32558.1 [NCBI]
Genbank nucleotide accession
PQ666542.1 [NCBI]
CDS location
range 155508 -> 156623
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACGCCATTTTTATCGGAAAGTAATTCAGTAAGATATAAAATAAGTATAGCGGGTTCTTGCCCGCTTTCTACTGCAGGACCATACGTCAAATTTCAGGATAATCTTGTTGGAAGCCAAACATTTAGTGCAGGTCTTCATTTAAGAGTTTTTGACCCTTCCACCGGAGCATTAGTTGACAGTAAGTCATATGCTTTTTCGACTTCAAATGATACTACATCAGCTGCTTTTGTTAGTTTCATGAATTCTTTTTCAAACAACAGACTTGTTGCTATATTAACTAGCGGAAAGGTTAATTTTCCTCCTGAAGTAGTATCTTGGTTAAGAGCAGCAGGAACGTCTGCTTTTCCATCTGATTCTTTATTGTCAAGATTTGACGTATCATATGCTGCTTTTTATACTTCTTCTAAAAGAGCTATTGCATTAGAACACGTTAAACTAAGTAATAGAAAAAGCACAGATGATTATCAAACTATTTTAGATGTTGTATTTGACAGTTTAGAAGACGTTGGAGCTACAGGATTTCCTAAAAGAACATATGAAATCGTTGAGCAATTTATGTCAGCTATCGGTGGAACTAATAACGAAATTGCACGTTTACCAACTTCATCTGCGATAAGTAAACTCTCTGATTATAATTTAATTCCTGGCGATGTTCTTTATCTTAAAGCACAGTTATATGCTGATGCTGATTTACTTGCGCTTGGAACTACAAATATATCTATCCGTTTTTATGATGAATTGGATGGATATATTTCTTCAACACATGCTGAGTTTACTGGACAAGCTGAGTCATGGGAATTAAAGGAAGATTATGTAGTTATTTCAGAAAATGCAGTAGGATTTACGATATATGCACAAAGAACTGCACAAGCAGGTCAAGGCGGCATGAGAAATTTAAGCTTTTCTGGAGTATCAAGAAATGGTGGAATTTCAAAACCTGCTGAATTTGGCGTCAATGGCATTCGTGTTAATTATATCTGTGAATCTGCTTCACCTCCGGATATAATGGTACTTCCTACGCAAGCATCGTCTAAAACCGGTAAAGTGTTTGGACAAGAATTTAGAGAAGTTTAA

Tertiary structure

PDB ID
b0bc86a6637496fd0c07c055d71320cd43033ebcd9620ad03831111b7014725e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50