Protein

View in Explore
Genbank accession
XCD07624.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANTNLGKVSLTPKGEYNAAAAYERLDVVQYEGSSFIVLRSVSGVTPTDGEDYMLAASKGDVGPQGETGPQGPQGIQGEQGIQGIQGEQGIQGETGPQGEQGPQGEQGPQGIQGLQGAQGNQGIQGEKGDAGAVFTPSVSAAGDLSWSNNGGLDNPDTVNIKGPQGDKGDTGPQGEKGDTGSGFAVLDYYDSLTLLEAAITNPEPGAAYGVGTAEPYDIYIYGETSGWVNNGPLQGAKGDTGPQGEQGIQGEQGPQGIQGEQGPQGIQGETGAQGPAGADGTTFTPSVDANGNLSWSNNGGLDNPETVNIKGPKGDKGDTGAQGEQGIQGIQGPEGPQGETGPAGADGQTGPAGADGADGADGVSCTHSWNGTVLTVTSASGTSSADLKGEKGDTGPAGADGQDGAPGATGEQGPTGPAGADGKDATINGVNALTLNAGGNVQVSQSGSVLTISAKPKFVSATLTTSGWSNNAQTVTVSGVLADETAQLIQPMPSAASQAAYIEAGILCTGQAANKLTFTADTVPTVALTVYVVITEVTA
Physico‐chemical
properties
protein length:540 AA
molecular weight: 53231,57640 Da
isoelectric point:4,05003
aromaticity:0,04259
hydropathy:-0,48185

Domains

Domains [InterPro]
IPR050149
59–424
IPR050149
IPR008160
78–133
IPR008160 IPR008160 IPR008160
G3DSA:1.20.5.320
105–151
G3DSA:1.20.5.320 G3DSA:1.20.5.320 G3DSA:1.20.5.320
XCD07624.1
1 540
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 33
[NCBI] 		3145751 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD07624.1 [NCBI]
Genbank nucleotide accession
PP511792 [NCBI]
CDS location
range 13880 -> 15502
strand +
CDS
ATGGCTAACACAAATCTCGGAAAGGTCTCCCTTACCCCGAAGGGAGAGTATAACGCAGCGGCTGCTTACGAGCGGCTGGACGTTGTGCAGTATGAGGGGAGCAGCTTTATTGTCCTGCGGAGTGTATCTGGGGTTACTCCCACAGACGGTGAGGACTATATGCTGGCGGCGTCAAAAGGTGACGTCGGGCCACAAGGTGAGACTGGCCCGCAAGGCCCTCAGGGCATTCAAGGCGAACAGGGTATCCAGGGGATCCAGGGGGAGCAGGGCATCCAGGGCGAAACCGGCCCTCAAGGCGAACAGGGGCCGCAAGGAGAACAAGGCCCCCAGGGTATCCAGGGCTTGCAGGGAGCGCAAGGCAATCAGGGCATCCAGGGTGAAAAAGGCGACGCTGGCGCGGTATTTACCCCATCTGTAAGCGCGGCTGGTGACCTCTCGTGGTCAAACAACGGCGGCTTGGACAATCCTGACACGGTTAACATTAAAGGCCCTCAGGGCGACAAAGGTGACACTGGCCCGCAGGGCGAAAAAGGCGATACAGGCTCTGGCTTTGCGGTGCTGGACTATTACGACAGTCTGACCTTGTTGGAAGCGGCAATTACCAACCCGGAACCCGGCGCGGCCTACGGTGTGGGCACGGCGGAACCCTACGATATCTATATCTACGGGGAGACCTCCGGCTGGGTAAACAATGGCCCGCTGCAAGGCGCAAAGGGTGATACTGGCCCCCAGGGAGAGCAGGGAATCCAGGGTGAGCAAGGCCCCCAGGGCATTCAAGGCGAACAAGGCCCTCAGGGCATCCAGGGCGAGACCGGCGCACAAGGCCCTGCGGGAGCAGATGGCACGACATTTACCCCCAGCGTGGACGCGAACGGGAACCTCTCGTGGTCAAATAACGGCGGTCTGGACAACCCTGAGACGGTCAATATCAAAGGCCCCAAGGGTGACAAGGGCGACACTGGCGCTCAAGGCGAACAGGGAATCCAGGGCATACAAGGCCCAGAAGGCCCCCAGGGTGAAACTGGCCCCGCTGGTGCTGATGGACAGACTGGCCCTGCTGGCGCGGACGGAGCAGATGGCGCGGACGGCGTATCCTGCACGCACTCATGGAACGGCACGGTTTTGACCGTGACCAGCGCAAGTGGCACGTCCTCCGCCGACCTCAAAGGCGAAAAGGGCGACACAGGCCCCGCTGGTGCGGATGGGCAGGATGGTGCCCCCGGAGCAACTGGCGAGCAAGGCCCCACCGGCCCCGCAGGTGCAGACGGCAAAGATGCCACTATCAACGGCGTAAACGCGTTAACCCTTAATGCGGGCGGAAACGTGCAGGTGTCTCAGTCTGGGAGCGTGCTGACCATCAGCGCAAAGCCCAAATTTGTATCCGCCACCCTCACCACTTCCGGTTGGAGTAACAACGCCCAGACAGTAACAGTCAGCGGGGTGCTCGCCGACGAGACCGCCCAACTCATCCAGCCCATGCCCAGCGCGGCAAGTCAGGCGGCGTACATTGAGGCGGGTATTCTCTGCACCGGACAGGCTGCCAACAAGCTGACCTTCACCGCTGATACAGTGCCCACAGTGGCGTTGACGGTGTATGTGGTCATTACGGAGGTTACGGCATGA

Tertiary structure

PDB ID
61b6e4aaee85daf5aaded2f1cba398a03ef4fc678568bb3ddad283d653f9b6d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank