Protein

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Genbank accession
CAB4191721.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MKSLLIFLCLFAANPKDFGAIGDGVTDDTAAIQSAANDCKSKLRAIQPTGGSYMGSCPELFFPAGKYRISQSIKLCPYQTVRGEDSILIQADPDSRILEFNGGYQNRVVGIQFVGGSSQVVFGNANVDSSFLTFRDCAFQAWSEYSVVADGTVDDHHLSATLSFQRCRWDGPRAVYTHCDTTQFSDCEAHFRGKNIPQDGGWITNAGFLRPNGIYSYGGTLGLYNVTLVPAAPLVPAEDGSAPKLINAYWIDNGGSVVAERVRFSGEGAGVAPIIHRAPVNTRSPFRGSKIAIHACQVSCGQDADSKSAVITLRGGFPQCLRITACDGLVSPSIPWIRVYPGYNLSADVATILKPASSLSQYTITIQGNQSFTSQPIPTPLQQFVGK
Physico‐chemical
properties
protein length:387 AA
molecular weight: 41543,43460 Da
isoelectric point:6,96627
aromaticity:0,09819
hydropathy:-0,06512

Domains

Domains [InterPro]
IPR011050
1–218
IPR011050
IPR012334
12–227
IPR012334
IPR024535
14–84
IPR024535
CAB4191721.1
1 387
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4191721.1 [NCBI]
Genbank nucleotide accession
LR797178 [NCBI]
CDS location
range 74441 -> 75604
strand -
CDS
ATGAAGTCACTGCTGATTTTTCTGTGCCTGTTTGCCGCGAACCCAAAGGACTTTGGCGCGATTGGGGATGGTGTTACTGATGATACCGCCGCAATCCAGTCCGCCGCCAATGATTGCAAGTCGAAACTGCGGGCGATTCAGCCAACCGGCGGAAGTTACATGGGAAGTTGCCCGGAACTGTTCTTCCCAGCGGGAAAGTACAGGATATCCCAGTCGATCAAACTCTGTCCGTACCAGACCGTCCGAGGCGAGGATTCAATTCTGATTCAGGCTGATCCTGATTCGCGAATTCTGGAGTTCAATGGGGGCTATCAGAATCGCGTAGTCGGCATACAGTTCGTTGGTGGATCGTCGCAAGTCGTCTTCGGTAACGCCAACGTGGACTCCAGTTTCTTGACGTTTCGCGACTGCGCATTTCAGGCGTGGTCAGAATACTCTGTTGTTGCCGACGGAACAGTGGACGATCACCATCTTTCAGCCACGCTCTCTTTTCAACGCTGCCGATGGGATGGTCCCCGTGCGGTCTATACACATTGCGATACCACTCAGTTCAGCGACTGCGAAGCTCATTTCCGTGGAAAGAATATCCCGCAAGACGGCGGATGGATCACGAATGCGGGATTCTTGAGGCCCAATGGGATCTACAGTTACGGCGGGACTCTCGGGCTTTACAATGTCACCCTTGTTCCAGCGGCCCCGCTCGTTCCTGCGGAGGACGGATCAGCGCCGAAGCTCATCAATGCGTACTGGATCGACAACGGCGGTTCAGTAGTCGCGGAACGTGTCCGATTCAGCGGCGAGGGGGCTGGCGTCGCGCCGATCATACATCGCGCCCCGGTGAATACTCGCAGCCCGTTTCGTGGCTCGAAGATTGCGATTCATGCCTGTCAGGTCTCCTGCGGTCAGGATGCCGACAGCAAGTCCGCAGTTATCACCTTGCGTGGCGGCTTCCCGCAATGCCTGCGGATCACCGCTTGTGATGGTCTGGTTTCACCGTCAATCCCGTGGATTCGCGTCTACCCCGGATACAATCTCTCTGCTGATGTTGCAACCATCCTGAAACCGGCGTCGTCGCTGAGTCAGTACACGATTACAATTCAGGGAAACCAATCGTTTACATCGCAGCCGATCCCGACCCCACTACAACAGTTCGTAGGAAAATAA

Tertiary structure

PDB ID
c1a919998955bce4fc8dd9048bc93d61569a0f7109303cd66a1bfe784f166a6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7050
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50