Protein

View in Explore
Genbank accession
AUR85244.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MTVKQFALGGVNEVVEFGKDGHQLDASNSGYIEIKNTGGTLIRVKGAAATASDEFVTKLQLDAVNALAGGYLSFSYDASGSISQLSGQGSGDAGAILYGDTYKVGTSGTFLGQSAQAGDLVTALVAGADVADNTGSNTDWMLIEIRTASDLADGSSTDHSSGKIIVKDAGVGTDKIADNAVTLAKMADNSVDTTEIVDRAVTGAKVGLAALTDENHANNTITKGKLAAAVQTTLSNADTEHNTRTPNAEAIIGASVDLDTDSTVPAHSNYATATNLHGQIAQLDTQIKNHDDIAALRKVSASYDGGAQNVGSSIASGRVITTIMVTPLTAALGANCVMSIGVSGDTSKYVAAEDIDLYEGTTQVFHINAELSSSEQIIATVSQGTSPQGSFLVTVQHG
Physico‐chemical
properties
protein length:398 AA
molecular weight: 40594,18430 Da
isoelectric point:4,51406
aromaticity:0,04271
hydropathy:-0,04774

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85244.1
1 398
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9668
Central domain 30 228 200 0,0227
C-terminal 229 398 169 0,8947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-228
C-terminal
229-398

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.071.A._10N.286.46.A12
[NCBI] 		1881313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85244.1 [NCBI]
Genbank nucleotide accession
MG592448 [NCBI]
CDS location
range 8478 -> 9674
strand +
CDS
ATGACAGTTAAGCAATTTGCCCTAGGTGGCGTAAACGAAGTAGTAGAGTTCGGTAAAGACGGCCATCAGCTTGATGCGTCAAACTCTGGCTACATTGAAATTAAAAACACAGGCGGTACGCTGATTCGCGTTAAAGGCGCGGCAGCCACAGCTAGTGATGAGTTCGTAACGAAGCTTCAACTTGACGCTGTAAACGCTCTAGCGGGTGGTTACTTGTCATTCAGCTATGATGCTTCAGGTAGTATCTCTCAGCTATCAGGTCAAGGCTCTGGCGATGCTGGTGCGATTCTTTACGGTGATACGTACAAGGTCGGCACTTCTGGAACTTTCCTTGGTCAATCTGCCCAGGCGGGCGACTTGGTAACAGCTCTAGTTGCTGGTGCTGATGTTGCAGATAACACCGGTTCAAACACTGACTGGATGCTAATCGAGATTCGTACGGCTTCAGACCTTGCTGACGGTTCATCAACTGACCATTCAAGCGGTAAGATTATCGTTAAAGATGCAGGTGTAGGCACTGATAAGATTGCTGATAACGCGGTAACTCTTGCGAAGATGGCTGATAACTCTGTTGATACAACAGAGATTGTTGACCGCGCTGTTACTGGTGCAAAAGTTGGCCTTGCTGCCCTTACCGATGAGAACCACGCAAACAACACAATCACAAAAGGCAAGTTAGCAGCAGCAGTTCAAACCACTCTGTCTAATGCTGATACTGAGCACAACACTCGAACCCCTAACGCTGAGGCTATCATTGGTGCATCTGTTGACCTTGATACTGACTCAACAGTCCCAGCTCACTCAAACTACGCGACAGCAACTAACCTACACGGCCAAATTGCTCAACTTGACACACAAATCAAGAATCATGATGACATTGCAGCACTACGCAAGGTTTCAGCATCTTACGATGGTGGAGCTCAAAACGTAGGCTCTTCAATTGCATCTGGTCGAGTTATCACCACTATCATGGTAACGCCTTTAACAGCAGCGCTTGGTGCAAACTGCGTGATGTCTATCGGCGTTTCTGGTGATACTTCTAAGTATGTAGCGGCGGAAGATATTGATTTGTATGAAGGTACAACTCAAGTCTTCCACATCAACGCTGAGCTATCAAGCTCTGAGCAAATCATTGCTACAGTTAGCCAGGGTACATCACCTCAAGGCTCGTTCCTTGTAACTGTTCAACACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2aac2e1cfe0066ba85cc97e21b0fbaf0021af3b23ec6233b31ccb70a3013cf0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank