Protein

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Genbank accession
ADO99517.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MGRVNVANLQGNSPDFRVTVDSGSTLNTQADVRIIGQSYHPIPTPPSNAFAKTFSPLYPFTGVNNTDGTSLLAPWGTSAVRSTTSADPSVTDSPVGGVPLKMQMDGSNDPYTSTYNNATWNIVEARAGEQWTFSVYVKSNQSGGINAQLFLFEARADGTYSTYNEQVFNNIGTSWQRISITRTFNQSDTAHLQVRVDGSDSGNANSHVLWWSGFQVNRGPLQDFTPDYRIDQTEYATHDQTGYIRYNTTEKRIEVKDTNLVWDAAAGSASAAGNFPLGSVGPGGGFTVGEGANDTSHQGFTHNGMRILHEGLRYNDGQAGDETLGATGNTRPFLDYISSTSGSDFAFHTGHTNPGNVSWPQYLAINVSERRYGQVLNRVRWYKHANAIGNCNIWGTNREVDRNNFTDTATNWTFLDRVHFGGSGSGSEGGQRSQNFSNTNGYRWYMIEMVDINSSALAYPNVGSRGGWAMYGVTFDNT
Physico‐chemical
properties
protein length:478 AA
molecular weight: 52234,11590 Da
isoelectric point:5,53733
aromaticity:0,11506
hydropathy:-0,58536

Domains

Domains [InterPro]
G3DSA:2.60.120.260
63–218
G3DSA:2.60.120.260
ADO99517.1
1 478
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn19
[NCBI] 		445684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99517.1 [NCBI]
Genbank nucleotide accession
GU071106 [NCBI]
CDS location
range 31776 -> 33212
strand +
CDS
ATGGGTCGCGTAAATGTCGCAAATTTACAAGGCAATTCACCTGATTTCAGGGTAACTGTCGATAGTGGATCGACTCTGAATACGCAAGCAGATGTTCGTATTATAGGTCAGAGTTATCATCCTATCCCTACACCTCCTAGCAATGCATTTGCTAAGACGTTTAGTCCTTTGTATCCATTTACAGGTGTTAATAATACAGATGGAACATCTTTGTTAGCACCTTGGGGAACTAGTGCTGTACGATCAACAACTAGTGCTGATCCATCAGTAACAGATTCTCCTGTTGGTGGTGTGCCACTAAAAATGCAAATGGATGGAAGTAATGATCCTTATACTTCCACTTATAATAATGCTACATGGAACATTGTTGAGGCAAGAGCAGGAGAACAGTGGACGTTTAGTGTATATGTGAAATCAAATCAGAGTGGCGGCATCAATGCTCAGTTATTTTTATTTGAAGCAAGAGCAGATGGAACATATAGTACTTACAACGAACAGGTATTCAATAATATTGGAACATCTTGGCAAAGAATTAGTATAACAAGAACATTTAATCAAAGTGATACTGCACATCTACAAGTTCGTGTAGATGGTTCTGATAGTGGAAATGCAAACTCCCATGTTCTTTGGTGGTCTGGATTTCAAGTAAATAGAGGACCACTACAAGATTTTACTCCCGATTATAGAATTGATCAAACTGAATATGCTACTCATGATCAGACTGGATATATCAGATACAATACAACTGAGAAAAGAATCGAAGTAAAAGATACTAATTTAGTATGGGATGCTGCTGCTGGTTCTGCATCAGCAGCAGGAAATTTCCCTCTTGGATCTGTAGGACCAGGTGGTGGATTTACTGTTGGTGAAGGTGCGAATGATACTTCACATCAGGGATTTACTCACAATGGAATGCGAATATTACATGAAGGATTGAGATATAATGATGGACAAGCGGGTGATGAAACACTAGGTGCAACAGGAAATACTAGACCATTTCTTGACTATATTTCATCGACAAGTGGCAGTGATTTTGCATTTCACACGGGACATACTAACCCTGGTAATGTTTCTTGGCCGCAGTATCTTGCGATTAATGTATCCGAACGAAGATATGGTCAAGTGTTAAATAGAGTCAGATGGTATAAACATGCAAATGCCATTGGTAACTGCAATATTTGGGGAACCAATAGAGAAGTAGATCGAAATAATTTTACTGATACTGCTACTAATTGGACTTTCTTGGATCGTGTACACTTTGGAGGATCTGGTTCTGGTAGTGAAGGTGGTCAAAGATCTCAGAATTTCTCTAACACCAATGGTTATCGTTGGTATATGATTGAAATGGTTGACATTAATTCTTCTGCATTAGCATATCCCAATGTAGGCAGTAGAGGTGGATGGGCAATGTATGGAGTAACATTCGACAACACATAA

Tertiary structure

PDB ID
39c46cbd590c85ff5f6fb841caf0af8b3ae519a97728ae9f04fe0b63823d8827
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn19 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank