Protein

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Genbank accession
QXO12800.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNTHIILKVSIVKYVGANGYYLALSNTGNVYSYGTNSNGQLGLGDTTQRTTWTLSATGVDDIYLNRNSNTYTSIIRKGKKLLYSGKRGAIIGDSSVSTQVLTWTEFYDLSTLTSDGSTVTDIQSSTGSIGVLLSNKNLYLTGTNLGTGSTAISPVLTLSSSNVDSFSINSTNTYIVRGSELFGTGSNAQLQISNSGTSFSTYTSITTSVSFALGGINNVYIVLLNGEIWGRGQNALISLGLSGSTGNRGLTKLMNTLILLPAKIHCWGYGASVIGSDGIWGCGQTLYSGSSSSNQTVWTKYYPITSFSGSLIDLTGTNTSTVLHTSTGIYGAGSDLLVNQGTSISYYKLEQPK
Physico‐chemical
properties
protein length:360 AA
molecular weight: 38018,04700 Da
isoelectric point:8,86190
aromaticity:0,09167
hydropathy:0,01833

Domains

Domains [InterPro]
DC_0433
ATT
1–127
DC_0433 DC_1778 DC_2125
IPR009091
STR
5–279
IPR009091
IPR009091
STR
17–313
IPR009091
QXO12800.1
1 360
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-313 | RBD 314-360
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12800.1
1 360
Domain Start End Length (AA) Confidence
N-terminal 1 113 113 0,1802
Central domain 114 315 203 0,3254
C-terminal 316 360 44 0,4767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-113
Central
114-315
C-terminal
316-360

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_49
[NCBI] 		2859284 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12800.1 [NCBI]
Genbank nucleotide accession
MW879344 [NCBI]
CDS location
range 356649 -> 357731
strand -
CDS
ATGTTACCATTTCCAATAATAAGTAATACACATATAATATTGAAGGTATCTATTGTAAAATACGTTGGTGCTAATGGATATTATCTTGCTTTAAGTAACACAGGAAATGTATACTCTTATGGTACAAATTCCAATGGTCAATTAGGATTAGGTGATACCACACAGAGGACTACATGGACATTGAGTGCAACTGGAGTGGATGATATATATTTGAATAGGAACTCCAACACATACACATCTATAATACGTAAGGGGAAGAAGCTCCTATACAGTGGTAAGAGGGGAGCAATAATAGGTGATAGTTCTGTATCTACTCAAGTACTGACATGGACAGAGTTTTATGATTTAAGCACCTTAACCTCAGATGGAAGTACTGTTACAGATATACAGAGTAGTACTGGTAGTATAGGAGTATTATTAAGTAATAAGAATTTATATTTAACTGGTACAAATTTAGGTACAGGAAGTACAGCGATAAGTCCAGTACTAACGTTGAGTTCTAGTAATGTAGATTCATTTAGTATTAACAGTACCAACACTTATATAGTACGGGGTTCAGAATTATTTGGTACTGGTTCAAATGCACAGTTACAGATTTCTAACAGTGGTACATCATTTAGTACTTACACTAGTATAACGACTTCTGTATCATTTGCATTAGGAGGAATTAACAATGTATATATAGTACTTCTTAATGGAGAGATATGGGGCAGGGGTCAGAATGCATTAATATCTTTAGGTTTAAGTGGAAGTACAGGTAATAGGGGTTTAACGAAGTTAATGAATACTTTAATACTGTTACCTGCTAAGATACATTGTTGGGGATATGGAGCATCGGTGATTGGAAGTGATGGTATATGGGGATGTGGGCAGACTTTATATTCTGGAAGTTCTTCATCGAATCAGACGGTCTGGACGAAGTATTATCCTATTACATCTTTTAGTGGATCATTAATTGATTTAACAGGTACAAACACGAGTACGGTATTGCACACGAGTACGGGGATATATGGAGCTGGTTCTGATTTATTAGTTAATCAGGGTACTTCTATATCGTACTATAAGTTAGAGCAGCCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4bb9be103e795b7ed07fcd84f521a4d32196f91440613aae6f8b96f04e4bfb3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_49 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank