Protein

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Genbank accession
YP_010356982.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
Protein sequence
MKNIITILLLLCSTIAISQVKAKQVRVDAASEGIVAINVEDALIELNSKIGGSLDPADQTKLDNITVTQAVNLDDIESKANSALQTETDPNLTKINVEGLGISYTSLTDVPTGGSSSFADLTGSPSDNTQLANELNSKVSFDNTTANSVEIGIVGGNSSDNAYVLIDNSGGSGGSWGDGGGSSNYVIKGENTITSNFTVKNSDGAGLSITNGNGGATNISGGIFPSDRTELIVSSNSIEALGYSNADITALGDRAVITKSYADANYGGGGSGTGLENIVEDLTPELGGNLDADGFGISGLSGISTKSILFTQLNANIDIKSNISGDLTYFKTISNDSTYGNTSIGYSALGALYGYESLDRSTAVGAFALKSASQSDNTAMGYGSLSGVIDGVQNTAIGSESAMFGNTNSVTAIGYQAGSYIEGGVLKNNLSGSSNSVFIGALTRAKDSVSGQNQIVIGYRATGNGVNTVTIGNSSITENYFNGEILLNGVEQKKQTSGASRPLTPDIGDSHFDTALGYPIWYNGTNWVDSTGTTR
Physico‐chemical
properties
protein length:535 AA
molecular weight: 54839,24540 Da
isoelectric point:4,23538
aromaticity:0,06168
hydropathy:-0,14411

Domains

Domains [InterPro]
DC_1988
STR
275–526
DC_1988
IPR011049
STR
334–490
IPR011049
IPR011049
STR
359–491
IPR011049
YP_010356982.1
1 535
Architecture
STR
STR 275-526 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010356982.1
1 535
Domain Start End Length (AA) Confidence
N-terminal 1 314 314 0,8587
Central domain 315 513 200 0,7355
C-terminal 514 535 21 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-314
Central
315-513
C-terminal
514-535

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage Ingeline_1
[NCBI] 		2745674 Uroviricota > Caudoviricetes > Duneviridae > Ingelinevirus ingeline >
Host Cellulophaga sp. HaHaR_3_176
[NCBI] 		1942464 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Cellulophaga >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010356982.1 [NCBI]
Genbank nucleotide accession
NC_062749.1 [NCBI]
CDS location
range 24089 -> 25696
strand +
CDS
ATGAAAAATATAATAACAATATTATTATTGCTTTGCAGTACTATAGCGATATCGCAAGTAAAAGCAAAACAGGTACGTGTAGATGCTGCTTCTGAAGGAATTGTAGCTATTAATGTTGAAGATGCATTAATTGAATTAAATAGTAAAATTGGTGGAAGCTTAGACCCTGCTGACCAAACAAAACTAGATAATATTACCGTAACACAGGCGGTTAATTTAGACGATATAGAAAGTAAAGCTAATTCTGCGTTGCAAACAGAAACAGACCCTAATTTAACTAAAATAAATGTAGAGGGTTTAGGTATTAGTTATACAAGTTTAACCGATGTTCCTACTGGTGGTTCATCATCATTCGCAGATTTAACAGGTTCACCAAGTGATAATACACAACTAGCTAACGAACTTAATAGTAAAGTATCATTTGATAATACAACAGCTAATTCAGTAGAAATTGGAATAGTAGGTGGTAATAGTTCTGATAATGCTTATGTGTTAATTGATAACTCAGGCGGTTCAGGTGGTTCATGGGGTGATGGAGGTGGTTCATCAAATTATGTAATTAAAGGAGAAAATACGATCACATCTAATTTCACTGTAAAGAACTCTGATGGAGCAGGATTATCAATAACAAATGGTAACGGTGGAGCTACGAATATTTCAGGTGGAATATTTCCTAGTGATAGAACAGAGTTAATAGTAAGCTCAAACTCTATAGAAGCTTTAGGTTATTCAAATGCAGATATTACTGCTTTAGGGGATAGAGCTGTTATTACAAAAAGTTACGCTGATGCTAATTATGGTGGTGGTGGAAGTGGAACAGGACTCGAAAATATAGTTGAAGATTTAACTCCTGAATTAGGGGGTAATTTAGATGCAGATGGTTTTGGTATTTCAGGATTATCTGGAATATCTACAAAATCAATTCTATTTACACAGCTAAACGCAAATATTGACATAAAAAGCAATATAAGCGGAGATTTAACATACTTTAAAACTATAAGTAATGATTCTACTTATGGTAACACATCTATTGGATATTCTGCATTAGGCGCTCTTTATGGTTATGAAAGTTTAGATAGGTCTACTGCTGTTGGTGCTTTTGCTTTAAAGTCCGCGTCACAATCGGATAATACTGCTATGGGTTACGGGTCTTTAAGTGGTGTAATTGATGGTGTACAAAACACAGCTATTGGCTCTGAATCGGCAATGTTTGGGAATACAAACAGCGTTACCGCTATAGGTTATCAAGCAGGTTCTTATATCGAAGGTGGTGTTTTAAAAAACAACCTAAGTGGATCTTCTAATTCAGTATTTATAGGTGCTTTAACTAGAGCTAAAGATAGTGTTTCTGGTCAAAATCAAATTGTAATAGGGTATCGAGCAACAGGTAATGGTGTAAATACGGTAACTATAGGAAATTCTTCAATAACAGAAAATTATTTTAATGGTGAAATATTATTAAACGGAGTAGAACAAAAAAAACAAACTTCAGGAGCTTCAAGACCTTTAACTCCAGATATAGGTGATAGCCATTTTGACACAGCACTAGGCTATCCAATATGGTATAACGGAACAAACTGGGTAGACTCAACAGGAACAACAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
382879082807f6a1a33b379ca5a33aa0241656af567b34230f1d5caf459e589f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5669
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank