Protein

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Genbank accession
UVX29113.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALVENVQTRYYSQDDLWCRVADYLAKDAPVLTGLRPDSSGNYAAAIERVSAKGVKVLRVPVGSYYVGDCHLTNPMLFIGDDLEGVNPLGAVFIKPSTAAKMFYFDGTSTRGTGGGFLRMRLQGAVSSDSGLMVEVTSWSYFGAENSAFNNLAGSALVLRDCMESHISGNLFRRMGASNGSVILLGDYVDIPNNNVNNLHIQNNTFGLCSGAWVKSTTSSNPDLIWVTDNKFEWDSVPYGANTATQHVLDFGQLSRAWITRNGFTHFRPDSDHNLYAGCIRIRSGAVGPIVISDNKAYGCEGEFWTIEGGLCRCLRQ
Physico‐chemical
properties
protein length:317 AA
molecular weight: 34587,53750 Da
isoelectric point:5,86422
aromaticity:0,10410
hydropathy:-0,11924

Domains

Domains [InterPro]
DC_1709
STR
6–312
DC_1709
IPR012334
STR
38–311
IPR012334
IPR011050
STR
44–303
IPR011050
UVX29113.1
1 317
Architecture
STR
STR 6-312 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVX29113.1
1 317
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,9666
Central domain 43 306 265 0,9956
C-terminal 307 317 10 0,3383
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-306
C-terminal
307-317

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiA1q
[NCBI] 		2874868 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX29113.1 [NCBI]
Genbank nucleotide accession
ON602726.1 [NCBI]
CDS location
range 4324 -> 5277
strand -
CDS
ATGGCACTAGTAGAGAACGTACAGACACGGTACTACAGCCAAGACGATTTGTGGTGCAGGGTAGCTGACTACTTAGCGAAGGACGCCCCGGTACTTACCGGACTCCGGCCGGATTCTTCCGGCAACTACGCAGCAGCTATTGAGCGGGTTTCCGCTAAAGGTGTAAAGGTACTGCGAGTACCCGTGGGATCCTATTATGTTGGAGACTGCCACCTAACTAACCCTATGCTGTTTATAGGTGATGACCTAGAGGGTGTCAACCCGCTTGGGGCTGTATTCATTAAACCTAGCACAGCTGCTAAGATGTTCTACTTTGACGGTACAAGTACACGTGGAACTGGGGGCGGATTCCTCAGAATGCGACTGCAAGGGGCTGTCAGCAGTGATTCGGGACTTATGGTTGAAGTCACCTCCTGGAGCTATTTTGGGGCGGAGAACTCTGCTTTTAATAACTTAGCGGGATCTGCGCTGGTGTTGCGTGACTGTATGGAGAGTCACATCTCAGGAAACTTATTCCGCAGGATGGGTGCCTCTAACGGCAGCGTTATACTCCTCGGGGATTACGTAGATATTCCTAATAACAACGTCAATAACCTGCACATTCAGAATAACACGTTCGGGCTGTGTTCTGGCGCGTGGGTTAAGAGCACAACAAGTAGCAACCCGGACCTGATATGGGTTACGGACAATAAGTTCGAGTGGGATAGCGTGCCGTACGGGGCTAACACAGCTACTCAGCACGTACTGGACTTTGGGCAACTGTCGCGCGCCTGGATTACCCGTAACGGATTCACGCACTTCCGCCCAGACTCCGACCATAACCTGTATGCTGGGTGTATTCGTATTAGGTCAGGGGCGGTTGGTCCAATTGTTATTTCCGATAACAAGGCATATGGGTGCGAAGGGGAATTCTGGACCATTGAAGGGGGGTTATGTAGATGCCTTCGACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
074dc900d748e029bb2b1a573d12a675fcca57d7ff3b67ace448e810b7ab803a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank