Protein

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Genbank accession
AOO12215.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSFYQEIRTAKAAAIGTIMPWVGNISDIPDGWIVCDGSQVSAKDFPLLARAIGDTYNLSTTVTQGLINTFANNASTEAGRIPDTYIYSPIDGSGGGATFAVIVADAGTQAGGAPNGVGGTVTVQRLQQGANYEINDVLTIPSGNSGGGSDILITVATVEEGSVSTFGGEFPSYQGEIVLPALINRPLVDMEQDYLGPGSPTGRVFDLDSTSVSEISSFIGVNSDTGVPTSFNDVATDVVFELNERTTAPAGDSGEISYYYSGKLQANTIVTGSGQGNRVMFFGPRKLGRGHIKGHGHGGRIDTIVKDPETQPGEGVIPWSNINYNFDAQVDTSDSDIFITDDNEFQLEYNMSDQLRGRSGFGGGIPGRVIGAINAENPPVNWTPRNVVWTPIKSVLTHPLTHRTFNEGVGLKKGALSGGIAGFNKGPGQREAVDYGQNGEQITQFSNGLTNWYPDLLEYNGDAEAGALADPSAFNTYDTFNSNAGWDFKRTTIGVAASRDIILSHTHDEFDVSFDLSGLRPLNSLNVYVTAPAGNLNLDNARNVGVFQINFNTTQPGMTSVYVIRAY
Physico‐chemical
properties
protein length:567 AA
molecular weight: 60210,65060 Da
isoelectric point:4,48911
aromaticity:0,09171
hydropathy:-0,22910

Domains

Domains [InterPro]
IPR037053
ATT
5–71
IPR037053 DC_0344
SSF88874
STR
7–60
SSF88874
IPR011083
ATT
16–62
IPR011083
AOO12215.1
1 567
Architecture
ATT
STR
ATT 5-71 | STR 179-567
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM44
[NCBI] 		1278485 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus rhodeisland44
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO12215.1 [NCBI]
Genbank nucleotide accession
KX349294.1 [NCBI]
CDS location
range 34270 -> 35973
strand +
CDS
ATGTCTTTCTATCAAGAGATCAGAACCGCAAAGGCAGCTGCCATCGGAACAATCATGCCATGGGTCGGGAATATCTCAGATATTCCTGACGGTTGGATTGTATGCGATGGGTCTCAAGTCAGTGCCAAAGACTTTCCATTGCTAGCAAGAGCAATTGGAGACACATACAATCTATCTACAACAGTTACTCAAGGTCTAATCAATACCTTTGCTAACAATGCATCAACAGAAGCAGGAAGAATTCCTGACACATATATCTACTCTCCAATTGATGGTAGTGGTGGTGGTGCAACTTTTGCTGTCATTGTTGCTGATGCAGGAACACAAGCAGGTGGTGCTCCTAATGGTGTTGGTGGAACAGTTACTGTTCAACGACTACAGCAAGGTGCTAACTATGAAATTAATGATGTTCTAACTATTCCCTCAGGCAACTCTGGTGGTGGATCTGATATTTTAATTACTGTAGCTACTGTTGAAGAGGGATCTGTTTCTACATTTGGTGGAGAGTTTCCTAGTTATCAGGGAGAGATTGTTCTTCCTGCTCTAATCAATAGACCTCTGGTTGATATGGAGCAAGATTATCTTGGACCAGGATCTCCCACTGGTAGAGTGTTTGATCTTGATTCAACTTCTGTATCAGAAATTAGTTCATTCATTGGTGTAAACTCAGACACAGGTGTTCCTACATCATTTAACGATGTTGCTACTGACGTTGTGTTTGAATTAAATGAGAGAACAACAGCACCAGCTGGTGATAGTGGAGAGATTTCATACTACTACAGTGGTAAACTACAGGCAAACACTATTGTCACAGGATCTGGTCAGGGTAATCGTGTTATGTTCTTCGGTCCTAGAAAACTAGGAAGAGGACACATTAAAGGTCATGGTCATGGCGGTAGAATTGATACTATCGTAAAAGATCCTGAAACACAACCAGGAGAAGGTGTGATTCCATGGTCAAACATCAACTACAACTTTGATGCACAGGTTGATACTTCGGATAGCGACATCTTTATCACAGATGATAACGAGTTTCAATTAGAATATAACATGAGTGATCAGTTGAGAGGTAGATCTGGTTTTGGTGGTGGTATCCCTGGACGTGTCATTGGTGCTATTAATGCAGAAAATCCACCAGTTAACTGGACTCCACGAAATGTTGTGTGGACTCCTATCAAATCAGTCTTGACTCATCCACTCACCCATAGAACATTTAACGAGGGTGTTGGTCTAAAGAAAGGTGCATTGTCTGGTGGTATTGCTGGATTTAACAAGGGTCCTGGACAAAGAGAAGCAGTTGACTATGGTCAGAATGGCGAGCAGATAACTCAGTTCAGTAATGGATTGACTAACTGGTATCCAGATCTTCTTGAATATAATGGTGATGCAGAAGCAGGAGCACTAGCAGATCCTTCAGCATTCAATACTTATGATACGTTTAATAGTAATGCTGGTTGGGACTTCAAGAGAACAACTATTGGAGTTGCTGCATCAAGAGATATTATTCTGTCACACACTCATGACGAATTTGATGTATCATTTGATCTTTCTGGTTTAAGACCATTAAATAGTTTGAACGTATATGTTACTGCTCCAGCAGGTAACTTGAATTTAGATAATGCAAGAAACGTTGGTGTATTCCAGATTAATTTCAACACGACTCAACCTGGAATGACTTCAGTATATGTAATCAGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9663c93481aa114be2f9fc81fa4060d99bcd3d20af49524d645848b9e581895e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3535
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50