Protein

View in Explore
Genbank accession
AGY47932.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLYPKKNLVPTTEGMLSTTQSYVAAPERVMFPIGWNFSSTEYVTIKGPYEFELTAVQNNRDIRVILPVKPLTVYKPSCETNGDVHVFYLDKTKTVPLGQAYNTISAPYTISTPAGCEYVAFALTNRGLGAGKFNFKNWQLEEVAKAGDPATAFEPFQLTNKKAGLYPKKNLFTFEGSKLTSAGGSSLTILSPNDAIVTSNSNSFTAIETAPMKVKQNTTYNINYIVERGSIDAPRVSPRRGSDRSGMALSDGEGFKSLTFFTGTETEIYFLLYANLGTTGSIQTNKYSKVIVTEGSEQPFEPYQLTNKRAKLISDGALNVPLSSDLWTLRAGTTYKRVEGNRAYWNSNQDYAGIQLMLVNVGITEDMLQGKDIVFGGDVHPSATVMLYYKRSDGTPVYIGVSKVTDNGARAMNIPYGSTEHRLYVQSDTGGRGELWCENVYIKFGTDKGYKPYNPTNKKALMYISKNYFNLDAASWTQGVRQGNKSIQASAYRITYIGEFPKVTPGQNFVMDFPANVPGYGTGHKFGVFIWDKDGNVLLDSGWQYSKYEFTIPPGGYEMSLNMGLSNDGSLTPVRASATQMVLYDKNAMTNKKAVLYPQKNLFPTDSSYWESGSIASGGQLTTLNNIRLKDFVPVEPNTQYIQSSNDASKTIVYFYDASKSFINTPNVFNRDGAKFTTPSNCVYLKVVLRDTDDAVTASPDGVGKKYIVQIEKGSTQTPYEPYRLGNKRA
Physico‐chemical
properties
protein length:730 AA
molecular weight: 80721,08260 Da
isoelectric point:8,91361
aromaticity:0,11781
hydropathy:-0,39836

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGY47932.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,9785
Central domain 34 265 233 0,6707
C-terminal 266 730 464 0,1018
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-265
C-terminal
266-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Page
[NCBI] 		1406786 Uroviricota > Caudoviricetes > Pagevirus >
Host Bacillus megaterium
[NCBI] 		1404 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGY47932.1 [NCBI]
Genbank nucleotide accession
KF669655 [NCBI]
CDS location
range 7780 -> 9972
strand +
CDS
ATGTTATATCCTAAAAAGAACTTAGTACCTACAACAGAAGGCATGTTGAGCACAACACAAAGCTACGTAGCAGCGCCGGAGCGCGTTATGTTTCCTATTGGTTGGAATTTCAGCAGCACAGAGTATGTCACAATCAAAGGTCCTTACGAATTTGAATTGACAGCGGTACAAAACAATAGAGATATTCGCGTTATCCTTCCAGTTAAGCCGCTTACAGTTTACAAGCCATCATGTGAAACTAATGGTGATGTTCATGTTTTCTACTTAGATAAAACAAAAACCGTTCCATTAGGGCAGGCATACAACACGATAAGCGCACCTTATACAATTTCAACGCCTGCTGGTTGTGAATACGTTGCATTCGCTCTTACAAATAGAGGACTTGGAGCGGGTAAATTCAACTTTAAAAACTGGCAGCTTGAAGAAGTCGCAAAGGCTGGCGACCCTGCAACAGCATTTGAGCCGTTCCAGTTAACGAATAAAAAGGCGGGTTTATACCCTAAAAAGAACTTATTCACGTTTGAAGGTTCTAAATTAACATCTGCAGGCGGTAGCTCTTTAACAATCCTTTCGCCTAATGACGCAATTGTTACATCTAATTCAAATAGCTTTACCGCAATCGAAACAGCGCCAATGAAAGTAAAGCAGAATACAACATATAACATTAACTACATTGTGGAACGTGGCAGTATAGACGCTCCGCGAGTTTCACCACGTAGAGGAAGTGACCGCTCAGGAATGGCGCTTTCTGATGGGGAAGGGTTTAAGAGTTTAACTTTCTTTACTGGAACTGAAACGGAAATCTATTTCCTTTTGTATGCGAATCTAGGAACAACAGGTTCAATACAAACTAACAAGTATTCAAAGGTTATAGTTACAGAGGGTTCGGAACAACCTTTTGAGCCTTACCAACTCACAAATAAACGCGCTAAGTTAATAAGCGATGGTGCTTTAAATGTTCCGTTAAGTTCTGATTTGTGGACACTTAGAGCAGGAACAACATACAAAAGAGTTGAAGGCAACCGCGCCTATTGGAACTCTAATCAAGATTATGCAGGCATTCAATTGATGCTCGTGAACGTAGGCATTACCGAAGATATGTTACAGGGTAAAGATATTGTGTTTGGTGGAGATGTTCACCCTTCTGCTACTGTAATGCTTTATTATAAAAGGTCTGACGGAACGCCGGTATATATAGGTGTATCAAAAGTAACTGATAACGGCGCAAGAGCTATGAATATTCCTTACGGTTCAACAGAGCACCGCTTATATGTACAAAGTGATACAGGTGGGCGCGGTGAGTTATGGTGTGAGAATGTATATATAAAGTTTGGTACGGATAAAGGATATAAACCGTACAATCCAACAAACAAGAAAGCTCTTATGTACATCAGCAAGAACTATTTCAACCTTGACGCTGCAAGTTGGACACAAGGCGTTAGACAAGGGAATAAATCTATACAGGCGAGTGCTTACCGTATTACTTACATTGGAGAATTTCCGAAAGTAACACCAGGGCAAAACTTTGTTATGGATTTCCCTGCGAATGTGCCGGGATATGGCACAGGGCATAAGTTCGGGGTTTTTATTTGGGATAAAGACGGAAATGTACTTTTAGATTCAGGTTGGCAGTACAGCAAGTATGAGTTTACTATTCCACCTGGCGGCTATGAAATGTCGTTAAATATGGGTTTATCGAATGACGGCTCTTTAACTCCTGTAAGAGCAAGCGCAACACAAATGGTTTTATATGATAAAAACGCCATGACGAATAAAAAAGCGGTGTTATATCCGCAAAAGAATTTATTTCCTACTGATTCGAGTTATTGGGAAAGTGGTTCGATTGCTTCGGGAGGTCAATTAACAACACTTAATAATATTCGCCTTAAAGATTTTGTGCCGGTTGAACCTAACACACAATACATTCAGTCATCTAATGACGCTTCTAAAACAATCGTTTACTTTTATGACGCGTCTAAATCCTTTATTAATACGCCTAACGTTTTCAACAGGGACGGTGCGAAGTTCACAACGCCTTCAAATTGTGTGTACTTGAAAGTTGTTTTAAGAGATACAGACGATGCGGTAACAGCTTCGCCGGACGGAGTAGGAAAGAAATATATAGTTCAAATTGAAAAAGGCAGCACGCAAACACCTTACGAGCCGTACCGTTTAGGTAACAAACGAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90ccf594bc396371cb46644b0df65bd57f31f0f82e1a5d830cf5a616a98ec58b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of Bacillus megaterium Podophage Page Lopez,M.S., Hodde,M.K., Chamakura,K.R. and Kuty Everett,G.F. 2014 24744341 GenBank