Protein

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Genbank accession
XDG30372.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALQLDMFYRVPLGRKLTNSEVDTNFSRLATACGQLEQMVGEGSNPQPAIDAAIAAHVAQPNPHTQYLIEAPNDNKTYGRRNQTWVETGGLSRLNTSVSTATSFVPDYYVVRDNCGVVFEHVAASYANNPSKAVIPAALFHMIGGLDDQEGAQGGNRLDGHIICVFNLTSINTPIDFAIGQEIRLNCNKSKVKEFIGTQHVIQPTNQGTGTCDKYVLENFNDMRSAVTHIGKFTREFLDPRIITTHAGGTFHAGDTITASRKLTLSDAGKSFMVNANSNVTLTIPRDWPAGAEMTFVQAGAGKIIIALESWDTNAMYSRGDRVQTEKLLDEVTIRSFQYGAIVLTFNLG
Physico‐chemical
properties
protein length:349 AA
molecular weight: 38079,47960 Da
isoelectric point:5,98881
aromaticity:0,08023
hydropathy:-0,20287

Domains

Domains [InterPro]
DC_1294
ATT
1–66
DC_1294 G3DSA:6.20.230.10 DC_1166
G3DSA:6.20.230.10
ATT
67–90
G3DSA:6.20.230.10
XDG30372.1
1 349
Architecture
ATT
STR
ATT 1-90 | STR 91-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDG30372.1
1 349
Domain Start End Length (AA) Confidence
N-terminal 1 87 87 0,9907
Central domain 88 286 200 0,1154
C-terminal 287 349 62 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-87
Central
88-286
C-terminal
287-349

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_HTN2
[NCBI] 		3236647 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDG30372.1 [NCBI]
Genbank nucleotide accession
PP916319 [NCBI]
CDS location
range 26566 -> 27615
strand +
CDS
ATGGCACTCCAACTCGATATGTTCTACCGCGTCCCGCTGGGTCGCAAACTGACTAACTCTGAAGTTGACACCAACTTCAGCCGCCTGGCTACAGCTTGTGGTCAACTGGAGCAAATGGTGGGTGAGGGCAGCAACCCGCAGCCTGCAATTGACGCGGCTATTGCCGCTCACGTGGCCCAGCCCAACCCCCATACGCAGTACCTCATCGAAGCCCCCAACGACAATAAGACGTATGGGCGTCGGAACCAGACTTGGGTTGAAACCGGCGGCCTGTCCCGCCTCAACACCAGCGTTAGCACCGCTACCAGCTTCGTGCCGGACTATTACGTTGTACGGGACAACTGCGGGGTTGTGTTTGAACACGTAGCGGCCAGCTACGCTAACAACCCGTCCAAGGCTGTTATTCCGGCTGCCCTGTTCCACATGATTGGCGGCCTGGATGACCAGGAAGGAGCGCAAGGTGGTAACCGTCTCGACGGCCACATCATTTGCGTATTTAACCTGACCAGTATTAACACCCCTATCGACTTTGCCATCGGGCAAGAAATTCGCCTTAACTGCAACAAGAGCAAAGTCAAAGAGTTCATTGGTACCCAGCACGTTATCCAGCCCACCAACCAGGGCACCGGCACCTGCGACAAGTACGTGCTGGAGAACTTCAACGATATGCGCAGCGCTGTTACGCACATCGGCAAGTTTACGCGGGAGTTCCTGGACCCTCGTATCATAACCACACACGCCGGCGGCACTTTCCATGCAGGCGACACCATCACCGCCAGCCGCAAGCTCACGCTGTCCGATGCCGGCAAGAGCTTCATGGTTAACGCCAACAGCAACGTTACCCTGACCATCCCCAGGGATTGGCCAGCCGGTGCCGAAATGACGTTTGTGCAGGCCGGTGCTGGTAAAATCATCATTGCGCTGGAGTCATGGGACACCAACGCCATGTACTCCCGTGGGGACCGGGTACAGACTGAAAAGCTGCTGGATGAAGTCACCATCCGTAGCTTCCAGTACGGCGCCATCGTCCTCACCTTTAACCTTGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
69ce95c17b731c459b4b1b35ff0d96aac5c9e976e42dd889a15f55ef59ab4d48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas aeruginosa phages for therapeutic use Nour El-Din,H. 2025-12-19 — GenBank