Protein

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Genbank accession
UGO52643.1 [GenBank]
Protein name
putative collagen-like protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MYDAATAYVKDDVVTFNNSSWFATAAVTGENPDVSDSWELLAAQGAPGPQGATGPAGPTGPAGPAGIQGPQGERGLHGEQGPSGPQGLQGAAGPVGPQGPAGPQGERGIQGPVGPQGLQGVKGDPGVNSTYTLPLKNYLVIALNEEEGARQTFRVPEDSSGAEIAFVVRNKDSSNTSPSGVYELGCGVTGTASMHFSGWIISNLNQPDKIRSASMLIASMTNSQRYFTQLAIGTRGDLFKGCLTNQETGELWYIEAFGTKPRGAGQTDLGRLSVKIEKRVDTVVGSLTKFPRV
Physico‐chemical
properties
protein length:293 AA
molecular weight: 30362,38360 Da
isoelectric point:5,16817
aromaticity:0,06826
hydropathy:-0,36724

Domains

Domains [InterPro]
G3DSA:2.10.10.20
ATT
1–40
G3DSA:2.10.10.20 PTHR24637
DC_2181
ATT
1–286
DC_2181
IPR036573
STR
2–41
IPR036573 IPR008160
IPR003610
CBM
2–41
IPR003610
UGO52643.1
1 293
Architecture
ATT
ATT 1-286 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoD_Opt-719
[NCBI] 		2902671 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO52643.1 [NCBI]
Genbank nucleotide accession
OL539451 [NCBI]
CDS location
range 7677 -> 8558
strand +
CDS
ATGTACGACGCAGCTACTGCTTACGTTAAAGATGATGTGGTTACATTCAATAACTCTAGCTGGTTTGCTACCGCCGCTGTGACCGGAGAGAATCCAGATGTTAGCGATTCCTGGGAGTTGCTGGCCGCGCAGGGCGCTCCAGGTCCGCAAGGCGCAACTGGTCCAGCAGGCCCAACTGGCCCGGCAGGCCCTGCAGGTATTCAGGGACCTCAGGGAGAGAGAGGGCTTCATGGTGAGCAAGGTCCGTCAGGCCCGCAAGGCTTGCAAGGTGCAGCTGGTCCAGTTGGACCTCAAGGCCCAGCAGGTCCTCAGGGTGAGCGAGGAATACAGGGTCCGGTTGGCCCTCAAGGATTGCAGGGTGTAAAAGGTGATCCAGGCGTTAATTCTACATATACACTACCTTTAAAAAACTACCTTGTAATAGCCCTTAATGAAGAGGAGGGGGCGAGGCAGACATTCAGGGTGCCAGAAGACAGTTCGGGAGCTGAAATAGCTTTTGTGGTCAGAAATAAAGATTCTTCAAACACTTCACCATCTGGAGTTTATGAGCTGGGATGTGGAGTGACTGGTACGGCTTCAATGCACTTTTCAGGTTGGATTATTAGTAACCTTAACCAACCAGATAAAATAAGATCAGCCTCTATGCTAATTGCTTCCATGACTAATAGTCAGCGATACTTTACGCAGTTAGCAATAGGAACAAGGGGTGATCTTTTTAAAGGTTGCTTAACCAATCAGGAAACTGGTGAGCTATGGTACATTGAGGCTTTTGGTACCAAGCCAAGAGGGGCAGGGCAAACCGACTTAGGTAGACTCTCAGTTAAGATTGAGAAAAGAGTTGATACAGTAGTTGGAAGCTTAACAAAATTCCCAAGAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f35e71e109cad2fe36c0b78405b94c1a431d5df6249a6cca01e8120e5818ce7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5510
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50